Repository inventory
====================

.. list-table::
  :header-rows: 1
  :class: inventory

  * - repo
    - description

  * - `bioconda-recipes <https://github.com/bioconda/bioconda-recipes>`_
    - Recipes that are automatically built

  * - `bioconda-utils <https://github.com/bioconda/bioconda-utils>`_
    - The build system that orchestrates everything

  * - `bioconda-docs <https://github.com/bioconda/bioconda-docs>`_
    - Home of the documentation

  * - `bioconda-common <https://github.com/bioconda/bioconda-common>`_
    - Centralized location for installation/config

  * - `bioconda-containers <https://github.com/bioconda/bioconda-containers>`_
    - Dockerfiles and CI config for building :ref:`bioconda containers <dockerfile-inventory>`

  * - `bioconda.github.io <https://github.com/bioconda/bioconda.github.io>`_
    - Docs built by bioconda-docs are pushed here for hosting by GitHub

  * - `bioconda-stats <https://github.com/bioconda/bioconda-stats>`_
    - Gathers and stores statistics from the bioconda channel

  * - `bioconda-plots <https://github.com/bioconda/bioconda-plots>`_
    - Converts data from bioconda-stats into plots used by the docs

  * - `bioconda-paper <https://github.com/bioconda/bioconda-paper>`_
    - Code and data for generating the figures in https://doi.org/10.1038/s41592-018-0046-7

  * - `bioconda-tests <https://github.com/bioconda/bioconda-tests>`_
    - Intended to trigger periodic tests of all packages

  * - `bioconda-outreach <https://github.com/bioconda/bioconda-outreach>`_
    - Presentations and training materials

  * - `bioconda-actions <https://github.com/bioconda/bioconda-actions>`_
    - DEPRECATED, previously used for factoring out GitHub Actions

  * - `bioconda-repodata-patches <https://github.com/bioconda/bioconda-repodata-patches>`_
    - DEPRECATED, this is now moved to the corresponding `recipe <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconda-repodata-patches>`_

  * - `bioconda-extended-base-image <https://github.com/bioconda/bioconda-repodata-patches>`_
    - DEPRECATED, this is now handled in `bioconda-containers <https://github.com/bioconda/bioconda-containers>`_

  * - `quay.io/organization/bioconda <https://quay.io/organization/bioconda>`_
    - Docker containers