:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'admixture'
.. highlight: bash

admixture
=========

.. conda:recipe:: admixture
   :replaces_section_title:
   :noindex:

   ADMIXTURE is a software tool for maximum likelihood estimation of individual ancestries from multilocus SNP genotype datasets.

   :homepage: http://www.genetics.ucla.edu/software/admixture/index.html
   :license: Free for Academic Use
   :recipe: /`admixture <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/admixture>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/admixture/meta.yaml>`_
   :links: biotools: :biotools:`admixture`, doi: :doi:`10.1101/gr.094052.109`

   


.. conda:package:: admixture

   |downloads_admixture| |docker_admixture|

   :versions:
      
      

      ``1.3.0-0``

      

   
   :requirements:

   .. rubric:: Installation

  You need a conda-compatible package manager
  (currently either `micromamba <https://mamba.readthedocs.io>`_, `mamba <https://mamba.readthedocs.io>`_, or `conda <https://docs.conda.io/projects/conda>`_)
  and the Bioconda channel already activated (see :ref:`set-up-channels`).

  While any of above package managers is fine, it is currently recommended to use either
  micromamba or mamba (see `here <https://mamba.readthedocs.io>`_ for installation instructions).
  We will show all commands using mamba below, but the arguments are the same for the two
  others.

  Given that you already have a conda environment in which you want to have this package, install with::

      mamba install admixture

   and update with::

      mamba update admixture

  To create a new environment, run::

      mamba create --name myenvname admixture

  with ``myenvname`` being a reasonable name for the environment
  (see e.g. the `mamba docs <https://mamba.readthedocs.io>`_ for details and further options).

  Alternatively, use the docker container::

      docker pull quay.io/biocontainers/admixture:<tag>

   (see `admixture/tags`_ for valid values for ``<tag>``)


.. |downloads_admixture| image:: https://img.shields.io/conda/dn/bioconda/admixture.svg?style=flat
   :target: https://anaconda.org/bioconda/admixture
   :alt:   (downloads)
.. |docker_admixture| image:: https://quay.io/repository/biocontainers/admixture/status
   :target: https://quay.io/repository/biocontainers/admixture
.. _`admixture/tags`: https://quay.io/repository/biocontainers/admixture?tab=tags


.. raw:: html

    <script>
        var package = "admixture";
        var versions = ["1.3.0"];
    </script>






Download stats
-----------------

.. raw:: html
    :file: ../../templates/package_dashboard.html

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