:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'aletsch'
.. highlight: bash

aletsch
=======

.. conda:recipe:: aletsch
   :replaces_section_title:
   :noindex:

   Aletsch is a scalable\, accurate\, and versatile assembler for multiple RNA\-seq samples.

   :homepage: https://github.com/Shao-Group/aletsch
   :license: BSD-3-Clause
   :recipe: /`aletsch <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/aletsch>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/aletsch/meta.yaml>`_

   


.. conda:package:: aletsch

   |downloads_aletsch| |docker_aletsch|

   :versions:
      
      

      ``1.0.3-3``,  ``1.0.3-2``,  ``1.0.3-1``,  ``1.0.3-0``,  ``1.0.2-0``,  ``1.0.1-0``

      

   
   :depends boost-cpp: ``>=1.74.0,<1.74.1.0a0``
   :depends htslib: ``>=1.14,<1.15.0a0``
   :depends libgcc-ng: ``>=10.3.0``
   :depends libstdcxx-ng: ``>=10.3.0``
   :requirements:

   .. rubric:: Installation

   With an activated Bioconda channel (see :ref:`set-up-channels`), install with::

      conda install aletsch

   and update with::

      conda update aletsch

   or use the docker container::

      docker pull quay.io/biocontainers/aletsch:<tag>

   (see `aletsch/tags`_ for valid values for ``<tag>``)


.. |downloads_aletsch| image:: https://img.shields.io/conda/dn/bioconda/aletsch.svg?style=flat
   :target: https://anaconda.org/bioconda/aletsch
   :alt:   (downloads)
.. |docker_aletsch| image:: https://quay.io/repository/biocontainers/aletsch/status
   :target: https://quay.io/repository/biocontainers/aletsch
.. _`aletsch/tags`: https://quay.io/repository/biocontainers/aletsch?tab=tags


.. raw:: html

    <script>
        var package = "aletsch";
        var versions = ["1.0.3","1.0.3","1.0.3","1.0.3","1.0.2"];
    </script>






Download stats
-----------------

.. raw:: html
    :file: ../../templates/package_dashboard.html

Link to this page
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Render an |install-with-bioconda| badge with the following MarkDown::

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.. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat
   :target: http://bioconda.github.io/recipes/aletsch/README.html