:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-anvilgcp' .. highlight: bash bioconductor-anvilgcp ===================== .. conda:recipe:: bioconductor-anvilgcp :replaces_section_title: :noindex: The GCP R Client for the AnVIL :homepage: https://bioconductor.org/packages/3.20/bioc/html/AnVILGCP.html :license: Artistic-2.0 :recipe: /`bioconductor-anvilgcp `_/`meta.yaml `_ The package provides a set of functions to interact with the Google Cloud Platform \(GCP\) services on the AnVIL platform. The package is designed to work with the AnVIL package. User\-level interaction with this package should be minimal. .. conda:package:: bioconductor-anvilgcp |downloads_bioconductor-anvilgcp| |docker_bioconductor-anvilgcp| :versions: ``1.0.0-0`` :depends bioconductor-anvilbase: ``>=1.0.0,<1.1.0`` :depends bioconductor-biocbaseutils: ``>=1.8.0,<1.9.0`` :depends r-base: ``>=4.4,<4.5.0a0`` :depends r-dplyr: :depends r-httr: :depends r-jsonlite: :depends r-rlang: :depends r-tibble: :depends r-tidyr: :requirements: :additional platforms: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bioconductor-anvilgcp and update with:: mamba update bioconductor-anvilgcp To create a new environment, run:: mamba create --name myenvname bioconductor-anvilgcp with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bioconductor-anvilgcp: (see `bioconductor-anvilgcp/tags`_ for valid values for ````) .. |downloads_bioconductor-anvilgcp| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-anvilgcp.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-anvilgcp :alt: (downloads) .. |docker_bioconductor-anvilgcp| image:: https://quay.io/repository/biocontainers/bioconductor-anvilgcp/status :target: https://quay.io/repository/biocontainers/bioconductor-anvilgcp .. _`bioconductor-anvilgcp/tags`: https://quay.io/repository/biocontainers/bioconductor-anvilgcp?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-anvilgcp/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-anvilgcp/README.html