:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'bioconductor-basilisk.utils'
.. highlight: bash

bioconductor-basilisk.utils
===========================

.. conda:recipe:: bioconductor-basilisk.utils
   :replaces_section_title:
   :noindex:

   Basilisk Installation Utilities

   :homepage: https://bioconductor.org/packages/3.18/bioc/html/basilisk.utils.html
   :license: GPL-3
   :recipe: /`bioconductor-basilisk.utils <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-basilisk.utils>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-basilisk.utils/meta.yaml>`_

   Implements utilities for installation of the basilisk package\, primarily for creation of the underlying Conda instance. This allows us to avoid re\-writing the same R code in both the configure script \(for centrally administered R installations\) and in the lazy installation mechanism \(for distributed package binaries\). It is highly unlikely that developers \- or\, heaven forbid\, end\-users\! \- will need to interact with this package directly\; they should be using the basilisk package instead.


.. conda:package:: bioconductor-basilisk.utils

   |downloads_bioconductor-basilisk.utils| |docker_bioconductor-basilisk.utils|

   :versions:
      
      

      ``1.14.1-0``,  ``1.12.1-0``,  ``1.10.0-0``,  ``1.6.0-0``,  ``1.4.0-0``,  ``1.2.2-0``,  ``1.2.0-0``,  ``1.0.0-0``

      

   
   :depends bioconductor-dir.expiry: ``>=1.10.0,<1.11.0``
   :depends r-base: ``>=4.3,<4.4.0a0``
   :requirements:

   .. rubric:: Installation

  You need a conda-compatible package manager
  (currently either `micromamba <https://mamba.readthedocs.io>`_, `mamba <https://mamba.readthedocs.io>`_, or `conda <https://docs.conda.io/projects/conda>`_)
  and the Bioconda channel already activated (see :ref:`set-up-channels`).

  While any of above package managers is fine, it is currently recommended to use either
  micromamba or mamba (see `here <https://mamba.readthedocs.io>`_ for installation instructions).
  We will show all commands using mamba below, but the arguments are the same for the two
  others.

  Given that you already have a conda environment in which you want to have this package, install with::

      mamba install bioconductor-basilisk.utils

   and update with::

      mamba update bioconductor-basilisk.utils

  To create a new environment, run::

      mamba create --name myenvname bioconductor-basilisk.utils

  with ``myenvname`` being a reasonable name for the environment
  (see e.g. the `mamba docs <https://mamba.readthedocs.io>`_ for details and further options).

  Alternatively, use the docker container::

      docker pull quay.io/biocontainers/bioconductor-basilisk.utils:<tag>

   (see `bioconductor-basilisk.utils/tags`_ for valid values for ``<tag>``)


.. |downloads_bioconductor-basilisk.utils| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-basilisk.utils.svg?style=flat
   :target: https://anaconda.org/bioconda/bioconductor-basilisk.utils
   :alt:   (downloads)
.. |docker_bioconductor-basilisk.utils| image:: https://quay.io/repository/biocontainers/bioconductor-basilisk.utils/status
   :target: https://quay.io/repository/biocontainers/bioconductor-basilisk.utils
.. _`bioconductor-basilisk.utils/tags`: https://quay.io/repository/biocontainers/bioconductor-basilisk.utils?tab=tags


.. raw:: html

    <script>
        var package = "bioconductor-basilisk.utils";
        var versions = ["1.14.1","1.12.1","1.10.0","1.6.0","1.4.0"];
    </script>






Download stats
-----------------

.. raw:: html
    :file: ../../templates/package_dashboard.html

Link to this page
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Render an |install-with-bioconda| badge with the following MarkDown::

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.. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat
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