:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'bioconductor-biocfilecache'
.. highlight: bash

bioconductor-biocfilecache
==========================

.. conda:recipe:: bioconductor-biocfilecache
   :replaces_section_title:
   :noindex:

   Manage Files Across Sessions

   :homepage: https://bioconductor.org/packages/3.18/bioc/html/BiocFileCache.html
   :license: Artistic-2.0
   :recipe: /`bioconductor-biocfilecache <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-biocfilecache>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-biocfilecache/meta.yaml>`_

   This package creates a persistent on\-disk cache of files that the user can add\, update\, and retrieve. It is useful for managing resources \(such as custom Txdb objects\) that are costly or difficult to create\, web resources\, and data files used across sessions.


.. conda:package:: bioconductor-biocfilecache

   |downloads_bioconductor-biocfilecache| |docker_bioconductor-biocfilecache|

   :versions:
      
      
      .. raw:: html

         <details><summary><span class="truncated-version-list"><code>2.10.1-0</code>,  <code>2.8.0-0</code>,  <code>2.6.0-0</code>,  <code>2.2.0-0</code>,  <code>2.0.0-0</code>,  <code>1.14.0-1</code>,  <code>1.14.0-0</code>,  <code>1.12.0-0</code>,  <code>1.10.0-0</code>,  </span></summary>
      

      ``2.10.1-0``,  ``2.8.0-0``,  ``2.6.0-0``,  ``2.2.0-0``,  ``2.0.0-0``,  ``1.14.0-1``,  ``1.14.0-0``,  ``1.12.0-0``,  ``1.10.0-0``,  ``1.8.0-1``,  ``1.8.0-0``,  ``1.6.0-0``,  ``1.4.0-0``,  ``1.2.3-0``

      
      .. raw:: html

         </details>
      

   
   :depends r-base: ``>=4.3,<4.4.0a0``
   :depends r-curl: 
   :depends r-dbi: 
   :depends r-dbplyr: ``>=1.0.0``
   :depends r-dplyr: 
   :depends r-filelock: 
   :depends r-httr: 
   :depends r-rsqlite: 
   :requirements:

   .. rubric:: Installation

  You need a conda-compatible package manager
  (currently either `micromamba <https://mamba.readthedocs.io>`_, `mamba <https://mamba.readthedocs.io>`_, or `conda <https://docs.conda.io/projects/conda>`_)
  and the Bioconda channel already activated (see :ref:`set-up-channels`).

  While any of above package managers is fine, it is currently recommended to use either
  micromamba or mamba (see `here <https://mamba.readthedocs.io>`_ for installation instructions).
  We will show all commands using mamba below, but the arguments are the same for the two
  others.

  Given that you already have a conda environment in which you want to have this package, install with::

      mamba install bioconductor-biocfilecache

   and update with::

      mamba update bioconductor-biocfilecache

  To create a new environment, run::

      mamba create --name myenvname bioconductor-biocfilecache

  with ``myenvname`` being a reasonable name for the environment
  (see e.g. the `mamba docs <https://mamba.readthedocs.io>`_ for details and further options).

  Alternatively, use the docker container::

      docker pull quay.io/biocontainers/bioconductor-biocfilecache:<tag>

   (see `bioconductor-biocfilecache/tags`_ for valid values for ``<tag>``)


.. |downloads_bioconductor-biocfilecache| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-biocfilecache.svg?style=flat
   :target: https://anaconda.org/bioconda/bioconductor-biocfilecache
   :alt:   (downloads)
.. |docker_bioconductor-biocfilecache| image:: https://quay.io/repository/biocontainers/bioconductor-biocfilecache/status
   :target: https://quay.io/repository/biocontainers/bioconductor-biocfilecache
.. _`bioconductor-biocfilecache/tags`: https://quay.io/repository/biocontainers/bioconductor-biocfilecache?tab=tags


.. raw:: html

    <script>
        var package = "bioconductor-biocfilecache";
        var versions = ["2.10.1","2.8.0","2.6.0","2.2.0","2.0.0"];
    </script>






Download stats
-----------------

.. raw:: html
    :file: ../../templates/package_dashboard.html

Link to this page
-----------------

Render an |install-with-bioconda| badge with the following MarkDown::

   [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-biocfilecache/README.html)

.. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat
   :target: http://bioconda.github.io/recipes/bioconductor-biocfilecache/README.html