:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-cqn' .. highlight: bash bioconductor-cqn ================ .. conda:recipe:: bioconductor-cqn :replaces_section_title: :noindex: Conditional quantile normalization :homepage: https://bioconductor.org/packages/3.14/bioc/html/cqn.html :license: Artistic-2.0 :recipe: /`bioconductor-cqn `_/`meta.yaml `_ :links: biotools: :biotools:`cqn` A normalization tool for RNA\-Seq data\, implementing the conditional quantile normalization method. .. conda:package:: bioconductor-cqn |downloads_bioconductor-cqn| |docker_bioconductor-cqn| :versions: .. raw:: html
1.40.0-01.38.0-01.36.0-11.36.0-01.34.0-01.32.0-01.30.0-11.30.0-01.28.1-0 ``1.40.0-0``,  ``1.38.0-0``,  ``1.36.0-1``,  ``1.36.0-0``,  ``1.34.0-0``,  ``1.32.0-0``,  ``1.30.0-1``,  ``1.30.0-0``,  ``1.28.1-0``,  ``1.28.0-0``,  ``1.26.0-0``,  ``1.24.0-0``,  ``1.22.0-0`` .. raw:: html
:depends bioconductor-preprocesscore: ``>=1.56.0,<1.57.0`` :depends r-base: ``>=4.1,<4.2.0a0`` :depends r-mclust: :depends r-nor1mix: :depends r-quantreg: :requirements: .. rubric:: Installation With an activated Bioconda channel (see :ref:`set-up-channels`), install with:: conda install bioconductor-cqn and update with:: conda update bioconductor-cqn or use the docker container:: docker pull quay.io/biocontainers/bioconductor-cqn: (see `bioconductor-cqn/tags`_ for valid values for ````) .. |downloads_bioconductor-cqn| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-cqn.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-cqn :alt: (downloads) .. |docker_bioconductor-cqn| image:: https://quay.io/repository/biocontainers/bioconductor-cqn/status :target: https://quay.io/repository/biocontainers/bioconductor-cqn .. _`bioconductor-cqn/tags`: https://quay.io/repository/biocontainers/bioconductor-cqn?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-cqn/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-cqn/README.html