:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'bioconductor-davidtiling'
.. highlight: bash

bioconductor-davidtiling
========================

.. conda:recipe:: bioconductor-davidtiling
   :replaces_section_title:
   :noindex:

   Data and analysis scripts for David\, Huber et al. yeast tiling array paper

   :homepage: https://bioconductor.org/packages/3.14/data/experiment/html/davidTiling.html
   :license: LGPL
   :recipe: /`bioconductor-davidtiling <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-davidtiling>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-davidtiling/meta.yaml>`_

   This package contains the data for the paper by L. David et al. in PNAS 2006 \(PMID 16569694\)\: 8 CEL files of Affymetrix genechips\, an ExpressionSet object with the raw feature data\, a probe annotation data structure for the chip and the yeast genome annotation \(GFF file\) that was used. In addition\, some custom\-written analysis functions are provided\, as well as R scripts in the scripts directory.


.. conda:package:: bioconductor-davidtiling

   |downloads_bioconductor-davidtiling| |docker_bioconductor-davidtiling|

   :versions:
      
      

      ``1.34.0-0``,  ``1.32.0-0``,  ``1.30.0-1``,  ``1.30.0-0``,  ``1.28.0-0``,  ``1.26.0-0``,  ``1.24.0-1``,  ``1.22.0-0``

      

   
   :depends bioconductor-biobase: ``>=2.54.0,<2.55.0``
   :depends bioconductor-go.db: ``>=3.14.0,<3.15.0``
   :depends bioconductor-tilingarray: ``>=1.72.0,<1.73.0``
   :depends curl: ``>=7.79.1,<8.0a0``
   :depends r-base: ``>=4.1,<4.2.0a0``
   :requirements:

   .. rubric:: Installation

   With an activated Bioconda channel (see :ref:`set-up-channels`), install with::

      conda install bioconductor-davidtiling

   and update with::

      conda update bioconductor-davidtiling

   or use the docker container::

      docker pull quay.io/biocontainers/bioconductor-davidtiling:<tag>

   (see `bioconductor-davidtiling/tags`_ for valid values for ``<tag>``)


.. |downloads_bioconductor-davidtiling| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-davidtiling.svg?style=flat
   :target: https://anaconda.org/bioconda/bioconductor-davidtiling
   :alt:   (downloads)
.. |docker_bioconductor-davidtiling| image:: https://quay.io/repository/biocontainers/bioconductor-davidtiling/status
   :target: https://quay.io/repository/biocontainers/bioconductor-davidtiling
.. _`bioconductor-davidtiling/tags`: https://quay.io/repository/biocontainers/bioconductor-davidtiling?tab=tags


.. raw:: html

    <script>
        var package = "bioconductor-davidtiling";
        var versions = ["1.34.0","1.32.0","1.30.0","1.30.0","1.28.0"];
    </script>






Download stats
-----------------

.. raw:: html
    :file: ../../templates/package_dashboard.html

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