:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'bioconductor-ecolitk'
.. highlight: bash

bioconductor-ecolitk
====================

.. conda:recipe:: bioconductor-ecolitk
   :replaces_section_title:
   :noindex:

   Meta\-data and tools for E. coli

   :homepage: https://bioconductor.org/packages/3.14/bioc/html/ecolitk.html
   :license: GPL (>= 2)
   :recipe: /`bioconductor-ecolitk <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-ecolitk>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-ecolitk/meta.yaml>`_

   Meta\-data and tools to work with E. coli. The tools are mostly plotting functions to work with circular genomes. They can used with other genomes\/plasmids.


.. conda:package:: bioconductor-ecolitk

   |downloads_bioconductor-ecolitk| |docker_bioconductor-ecolitk|

   :versions:
      
      

      ``1.66.0-0``,  ``1.64.0-0``,  ``1.62.0-1``,  ``1.62.0-0``,  ``1.60.0-0``,  ``1.58.0-0``,  ``1.56.0-1``,  ``1.54.0-0``

      

   
   :depends bioconductor-biobase: ``>=2.54.0,<2.55.0``
   :depends r-base: ``>=4.1,<4.2.0a0``
   :requirements:

   .. rubric:: Installation

   With an activated Bioconda channel (see :ref:`set-up-channels`), install with::

      conda install bioconductor-ecolitk

   and update with::

      conda update bioconductor-ecolitk

   or use the docker container::

      docker pull quay.io/biocontainers/bioconductor-ecolitk:<tag>

   (see `bioconductor-ecolitk/tags`_ for valid values for ``<tag>``)


.. |downloads_bioconductor-ecolitk| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-ecolitk.svg?style=flat
   :target: https://anaconda.org/bioconda/bioconductor-ecolitk
   :alt:   (downloads)
.. |docker_bioconductor-ecolitk| image:: https://quay.io/repository/biocontainers/bioconductor-ecolitk/status
   :target: https://quay.io/repository/biocontainers/bioconductor-ecolitk
.. _`bioconductor-ecolitk/tags`: https://quay.io/repository/biocontainers/bioconductor-ecolitk?tab=tags


.. raw:: html

    <script>
        var package = "bioconductor-ecolitk";
        var versions = ["1.66.0","1.64.0","1.62.0","1.62.0","1.60.0"];
    </script>






Download stats
-----------------

.. raw:: html
    :file: ../../templates/package_dashboard.html

Link to this page
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Render an |install-with-bioconda| badge with the following MarkDown::

   [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-ecolitk/README.html)

.. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat
   :target: http://bioconda.github.io/recipes/bioconductor-ecolitk/README.html