:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-fdb.ucsc.snp137common.hg19' .. highlight: bash bioconductor-fdb.ucsc.snp137common.hg19 ======================================= .. conda:recipe:: bioconductor-fdb.ucsc.snp137common.hg19 :replaces_section_title: :noindex: UCSC common SNPs track for dbSNP build 137 :homepage: https://bioconductor.org/packages/3.18/data/annotation/html/FDb.UCSC.snp137common.hg19.html :license: Artistic-2.0 :recipe: /`bioconductor-fdb.ucsc.snp137common.hg19 `_/`meta.yaml `_ makeFeatureDbFromUCSC cannot cope with this track\, hence a package .. conda:package:: bioconductor-fdb.ucsc.snp137common.hg19 |downloads_bioconductor-fdb.ucsc.snp137common.hg19| |docker_bioconductor-fdb.ucsc.snp137common.hg19| :versions: .. raw:: html
1.0.0-121.0.0-111.0.0-101.0.0-91.0.0-81.0.0-71.0.0-61.0.0-51.0.0-4 ``1.0.0-12``,  ``1.0.0-11``,  ``1.0.0-10``,  ``1.0.0-9``,  ``1.0.0-8``,  ``1.0.0-7``,  ``1.0.0-6``,  ``1.0.0-5``,  ``1.0.0-4``,  ``1.0.0-3``,  ``1.0.0-2``,  ``1.0.0-0`` .. raw:: html
:depends bioconductor-annotationdbi: ``>=1.64.0,<1.65.0`` :depends bioconductor-data-packages: ``>=20231203`` :depends bioconductor-genomicfeatures: ``>=1.54.0,<1.55.0`` :depends curl: :depends r-base: ``>=4.3,<4.4.0a0`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bioconductor-fdb.ucsc.snp137common.hg19 and update with:: mamba update bioconductor-fdb.ucsc.snp137common.hg19 To create a new environment, run:: mamba create --name myenvname bioconductor-fdb.ucsc.snp137common.hg19 with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bioconductor-fdb.ucsc.snp137common.hg19: (see `bioconductor-fdb.ucsc.snp137common.hg19/tags`_ for valid values for ````) .. |downloads_bioconductor-fdb.ucsc.snp137common.hg19| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-fdb.ucsc.snp137common.hg19.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-fdb.ucsc.snp137common.hg19 :alt: (downloads) .. |docker_bioconductor-fdb.ucsc.snp137common.hg19| image:: https://quay.io/repository/biocontainers/bioconductor-fdb.ucsc.snp137common.hg19/status :target: https://quay.io/repository/biocontainers/bioconductor-fdb.ucsc.snp137common.hg19 .. _`bioconductor-fdb.ucsc.snp137common.hg19/tags`: https://quay.io/repository/biocontainers/bioconductor-fdb.ucsc.snp137common.hg19?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-fdb.ucsc.snp137common.hg19/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-fdb.ucsc.snp137common.hg19/README.html