:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-genetclassifier' .. highlight: bash bioconductor-genetclassifier ============================ .. conda:recipe:: bioconductor-genetclassifier :replaces_section_title: :noindex: Classify diseases and build associated gene networks using gene expression profiles :homepage: https://bioconductor.org/packages/3.14/bioc/html/geNetClassifier.html :license: GPL (>= 2) :recipe: /`bioconductor-genetclassifier `_/`meta.yaml `_ :links: biotools: :biotools:`genetclassifier` Comprehensive package to automatically train and validate a multi\-class SVM classifier based on gene expression data. Provides transparent selection of gene markers\, their coexpression networks\, and an interface to query the classifier. .. conda:package:: bioconductor-genetclassifier |downloads_bioconductor-genetclassifier| |docker_bioconductor-genetclassifier| :versions: .. raw:: html
1.34.0-01.32.0-01.30.0-11.30.0-01.28.0-01.26.0-01.24.0-11.22.0-01.20.0-0 ``1.34.0-0``,  ``1.32.0-0``,  ``1.30.0-1``,  ``1.30.0-0``,  ``1.28.0-0``,  ``1.26.0-0``,  ``1.24.0-1``,  ``1.22.0-0``,  ``1.20.0-0``,  ``1.18.0-0`` .. raw:: html
:depends bioconductor-biobase: ``>=2.54.0,<2.55.0`` :depends bioconductor-ebarrays: ``>=2.58.0,<2.59.0`` :depends bioconductor-minet: ``>=3.52.0,<3.53.0`` :depends r-base: ``>=4.1,<4.2.0a0`` :depends r-e1071: :requirements: .. rubric:: Installation With an activated Bioconda channel (see :ref:`set-up-channels`), install with:: conda install bioconductor-genetclassifier and update with:: conda update bioconductor-genetclassifier or use the docker container:: docker pull quay.io/biocontainers/bioconductor-genetclassifier: (see `bioconductor-genetclassifier/tags`_ for valid values for ````) .. |downloads_bioconductor-genetclassifier| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-genetclassifier.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-genetclassifier :alt: (downloads) .. |docker_bioconductor-genetclassifier| image:: https://quay.io/repository/biocontainers/bioconductor-genetclassifier/status :target: https://quay.io/repository/biocontainers/bioconductor-genetclassifier .. _`bioconductor-genetclassifier/tags`: https://quay.io/repository/biocontainers/bioconductor-genetclassifier?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-genetclassifier/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-genetclassifier/README.html