:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-geosubmission' .. highlight: bash bioconductor-geosubmission ========================== .. conda:recipe:: bioconductor-geosubmission :replaces_section_title: :noindex: Prepares microarray data for submission to GEO :homepage: https://bioconductor.org/packages/3.14/bioc/html/GEOsubmission.html :license: GPL (>= 2) :recipe: /`bioconductor-geosubmission `_/`meta.yaml `_ :links: biotools: :biotools:`geosubmission`, doi: :doi:`10.1038/nmeth.3252` Helps to easily submit a microarray dataset and the associated sample information to GEO by preparing a single file for upload \(direct deposit\). .. conda:package:: bioconductor-geosubmission |downloads_bioconductor-geosubmission| |docker_bioconductor-geosubmission| :versions: .. raw:: html
1.46.0-01.44.0-01.42.0-11.42.0-01.40.0-01.38.0-01.36.0-11.34.0-01.32.0-0 ``1.46.0-0``,  ``1.44.0-0``,  ``1.42.0-1``,  ``1.42.0-0``,  ``1.40.0-0``,  ``1.38.0-0``,  ``1.36.0-1``,  ``1.34.0-0``,  ``1.32.0-0``,  ``1.30.0-0`` .. raw:: html
:depends bioconductor-affy: ``>=1.72.0,<1.73.0`` :depends bioconductor-biobase: ``>=2.54.0,<2.55.0`` :depends r-base: ``>=4.1,<4.2.0a0`` :requirements: .. rubric:: Installation With an activated Bioconda channel (see :ref:`set-up-channels`), install with:: conda install bioconductor-geosubmission and update with:: conda update bioconductor-geosubmission or use the docker container:: docker pull quay.io/biocontainers/bioconductor-geosubmission: (see `bioconductor-geosubmission/tags`_ for valid values for ````) .. |downloads_bioconductor-geosubmission| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-geosubmission.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-geosubmission :alt: (downloads) .. |docker_bioconductor-geosubmission| image:: https://quay.io/repository/biocontainers/bioconductor-geosubmission/status :target: https://quay.io/repository/biocontainers/bioconductor-geosubmission .. _`bioconductor-geosubmission/tags`: https://quay.io/repository/biocontainers/bioconductor-geosubmission?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-geosubmission/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-geosubmission/README.html