:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-keggandmetacoredzpathwaysgeo' .. highlight: bash bioconductor-keggandmetacoredzpathwaysgeo ========================================= .. conda:recipe:: bioconductor-keggandmetacoredzpathwaysgeo :replaces_section_title: :noindex: Disease Datasets from GEO :homepage: https://bioconductor.org/packages/3.14/data/experiment/html/KEGGandMetacoreDzPathwaysGEO.html :license: GPL-2 :recipe: /`bioconductor-keggandmetacoredzpathwaysgeo `_/`meta.yaml `_ This is a collection of 18 data sets for which the phenotype is a disease with a corresponding pathway in either KEGG or metacore database.This collection of datasets were used as gold standard in comparing gene set analysis methods. .. conda:package:: bioconductor-keggandmetacoredzpathwaysgeo |downloads_bioconductor-keggandmetacoredzpathwaysgeo| |docker_bioconductor-keggandmetacoredzpathwaysgeo| :versions: ``1.14.0-0``,  ``1.12.0-0``,  ``1.10.0-1``,  ``1.10.0-0``,  ``1.9.0-0``,  ``1.8.0-0``,  ``1.6.0-0``,  ``1.4.0-1``,  ``1.2.0-0`` :depends bioconductor-biobase: ``>=2.54.0,<2.55.0`` :depends bioconductor-biocgenerics: ``>=0.40.0,<0.41.0`` :depends curl: ``>=7.79.1,<8.0a0`` :depends r-base: ``>=4.1,<4.2.0a0`` :requirements: .. rubric:: Installation With an activated Bioconda channel (see :ref:`set-up-channels`), install with:: conda install bioconductor-keggandmetacoredzpathwaysgeo and update with:: conda update bioconductor-keggandmetacoredzpathwaysgeo or use the docker container:: docker pull quay.io/biocontainers/bioconductor-keggandmetacoredzpathwaysgeo: (see `bioconductor-keggandmetacoredzpathwaysgeo/tags`_ for valid values for ````) .. |downloads_bioconductor-keggandmetacoredzpathwaysgeo| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-keggandmetacoredzpathwaysgeo.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-keggandmetacoredzpathwaysgeo :alt: (downloads) .. |docker_bioconductor-keggandmetacoredzpathwaysgeo| image:: https://quay.io/repository/biocontainers/bioconductor-keggandmetacoredzpathwaysgeo/status :target: https://quay.io/repository/biocontainers/bioconductor-keggandmetacoredzpathwaysgeo .. _`bioconductor-keggandmetacoredzpathwaysgeo/tags`: https://quay.io/repository/biocontainers/bioconductor-keggandmetacoredzpathwaysgeo?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-keggandmetacoredzpathwaysgeo/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-keggandmetacoredzpathwaysgeo/README.html