:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'bioconductor-keggandmetacoredzpathwaysgeo'
.. highlight: bash

bioconductor-keggandmetacoredzpathwaysgeo
=========================================

.. conda:recipe:: bioconductor-keggandmetacoredzpathwaysgeo
   :replaces_section_title:
   :noindex:

   Disease Datasets from GEO

   :homepage: https://bioconductor.org/packages/3.14/data/experiment/html/KEGGandMetacoreDzPathwaysGEO.html
   :license: GPL-2
   :recipe: /`bioconductor-keggandmetacoredzpathwaysgeo <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-keggandmetacoredzpathwaysgeo>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-keggandmetacoredzpathwaysgeo/meta.yaml>`_

   This is a collection of 18 data sets for which the phenotype is a disease with a corresponding pathway in either KEGG or metacore database.This collection of datasets were used as gold standard in comparing gene set analysis methods.


.. conda:package:: bioconductor-keggandmetacoredzpathwaysgeo

   |downloads_bioconductor-keggandmetacoredzpathwaysgeo| |docker_bioconductor-keggandmetacoredzpathwaysgeo|

   :versions:
      
      

      ``1.14.0-0``,  ``1.12.0-0``,  ``1.10.0-1``,  ``1.10.0-0``,  ``1.9.0-0``,  ``1.8.0-0``,  ``1.6.0-0``,  ``1.4.0-1``,  ``1.2.0-0``

      

   
   :depends bioconductor-biobase: ``>=2.54.0,<2.55.0``
   :depends bioconductor-biocgenerics: ``>=0.40.0,<0.41.0``
   :depends curl: ``>=7.79.1,<8.0a0``
   :depends r-base: ``>=4.1,<4.2.0a0``
   :requirements:

   .. rubric:: Installation

   With an activated Bioconda channel (see :ref:`set-up-channels`), install with::

      conda install bioconductor-keggandmetacoredzpathwaysgeo

   and update with::

      conda update bioconductor-keggandmetacoredzpathwaysgeo

   or use the docker container::

      docker pull quay.io/biocontainers/bioconductor-keggandmetacoredzpathwaysgeo:<tag>

   (see `bioconductor-keggandmetacoredzpathwaysgeo/tags`_ for valid values for ``<tag>``)


.. |downloads_bioconductor-keggandmetacoredzpathwaysgeo| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-keggandmetacoredzpathwaysgeo.svg?style=flat
   :target: https://anaconda.org/bioconda/bioconductor-keggandmetacoredzpathwaysgeo
   :alt:   (downloads)
.. |docker_bioconductor-keggandmetacoredzpathwaysgeo| image:: https://quay.io/repository/biocontainers/bioconductor-keggandmetacoredzpathwaysgeo/status
   :target: https://quay.io/repository/biocontainers/bioconductor-keggandmetacoredzpathwaysgeo
.. _`bioconductor-keggandmetacoredzpathwaysgeo/tags`: https://quay.io/repository/biocontainers/bioconductor-keggandmetacoredzpathwaysgeo?tab=tags


.. raw:: html

    <script>
        var package = "bioconductor-keggandmetacoredzpathwaysgeo";
        var versions = ["1.14.0","1.12.0","1.10.0","1.10.0","1.9.0"];
    </script>






Download stats
-----------------

.. raw:: html
    :file: ../../templates/package_dashboard.html

Link to this page
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Render an |install-with-bioconda| badge with the following MarkDown::

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.. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat
   :target: http://bioconda.github.io/recipes/bioconductor-keggandmetacoredzpathwaysgeo/README.html