:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-lrbasedbi' .. highlight: bash bioconductor-lrbasedbi ====================== .. conda:recipe:: bioconductor-lrbasedbi :replaces_section_title: :noindex: DBI to construct LRBase\-related package :homepage: https://bioconductor.org/packages/3.18/bioc/html/LRBaseDbi.html :license: Artistic-2.0 :recipe: /`bioconductor-lrbasedbi `_/`meta.yaml `_ Interface to construct LRBase package \(LRBase.XXX.eg.db\). .. conda:package:: bioconductor-lrbasedbi |downloads_bioconductor-lrbasedbi| |docker_bioconductor-lrbasedbi| :versions: .. raw:: html
2.12.0-02.10.0-02.8.0-02.4.0-02.2.0-02.0.0-12.0.0-01.6.0-01.4.0-0 ``2.12.0-0``,  ``2.10.0-0``,  ``2.8.0-0``,  ``2.4.0-0``,  ``2.2.0-0``,  ``2.0.0-1``,  ``2.0.0-0``,  ``1.6.0-0``,  ``1.4.0-0``,  ``1.2.0-1``,  ``1.0.0-0`` .. raw:: html
:depends bioconductor-annotationdbi: ``>=1.64.0,<1.65.0`` :depends bioconductor-biobase: ``>=2.62.0,<2.63.0`` :depends r-base: ``>=4.3,<4.4.0a0`` :depends r-dbi: :depends r-rsqlite: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bioconductor-lrbasedbi and update with:: mamba update bioconductor-lrbasedbi To create a new environment, run:: mamba create --name myenvname bioconductor-lrbasedbi with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bioconductor-lrbasedbi: (see `bioconductor-lrbasedbi/tags`_ for valid values for ````) .. |downloads_bioconductor-lrbasedbi| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-lrbasedbi.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-lrbasedbi :alt: (downloads) .. |docker_bioconductor-lrbasedbi| image:: https://quay.io/repository/biocontainers/bioconductor-lrbasedbi/status :target: https://quay.io/repository/biocontainers/bioconductor-lrbasedbi .. _`bioconductor-lrbasedbi/tags`: https://quay.io/repository/biocontainers/bioconductor-lrbasedbi?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-lrbasedbi/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-lrbasedbi/README.html