:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'bioconductor-michip'
.. highlight: bash

bioconductor-michip
===================

.. conda:recipe:: bioconductor-michip
   :replaces_section_title:
   :noindex:

   MiChip Parsing and Summarizing Functions

   :homepage: https://bioconductor.org/packages/3.11/bioc/html/MiChip.html
   :license: GPL (>= 2)
   :recipe: /`bioconductor-michip <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-michip>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-michip/meta.yaml>`_
   :links: biotools: :biotools:`michip`, doi: :doi:`10.1038/nmeth.3252`

   This package takes the MiChip miRNA microarray .grp scanner output files and parses these out\, providing summary and plotting functions to analyse MiChip hybridizations. A set of hybridizations is packaged into an ExpressionSet allowing it to be used by other BioConductor packages.


.. conda:package:: bioconductor-michip

   |downloads_bioconductor-michip| |docker_bioconductor-michip|

   :versions:
      
      

      ``1.42.0-0``,  ``1.40.0-0``,  ``1.38.0-1``,  ``1.36.0-0``,  ``1.34.0-0``,  ``1.32.0-0``,  ``1.30.0-0``

      

   
   :depends bioconductor-biobase: ``>=2.48.0,<2.49.0``
   :depends r-base: ``>=4.0,<4.1.0a0``
   :requirements:

   .. rubric:: Installation

   With an activated Bioconda channel (see :ref:`set-up-channels`), install with::

      conda install bioconductor-michip

   and update with::

      conda update bioconductor-michip

   or use the docker container::

      docker pull quay.io/biocontainers/bioconductor-michip:<tag>

   (see `bioconductor-michip/tags`_ for valid values for ``<tag>``)


.. |downloads_bioconductor-michip| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-michip.svg?style=flat
   :target: https://anaconda.org/bioconda/bioconductor-michip
   :alt:   (downloads)
.. |docker_bioconductor-michip| image:: https://quay.io/repository/biocontainers/bioconductor-michip/status
   :target: https://quay.io/repository/biocontainers/bioconductor-michip
.. _`bioconductor-michip/tags`: https://quay.io/repository/biocontainers/bioconductor-michip?tab=tags







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