:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-mogsa' .. highlight: bash bioconductor-mogsa ================== .. conda:recipe:: bioconductor-mogsa :replaces_section_title: :noindex: Multiple omics data integrative clustering and gene set analysis :homepage: https://bioconductor.org/packages/3.18/bioc/html/mogsa.html :license: GPL-2 :recipe: /`bioconductor-mogsa `_/`meta.yaml `_ This package provide a method for doing gene set analysis based on multiple omics data. .. conda:package:: bioconductor-mogsa |downloads_bioconductor-mogsa| |docker_bioconductor-mogsa| :versions: .. raw:: html
1.36.0-01.34.0-01.32.0-01.28.0-01.26.0-01.24.0-11.24.0-01.21.0-01.20.0-0 ``1.36.0-0``,  ``1.34.0-0``,  ``1.32.0-0``,  ``1.28.0-0``,  ``1.26.0-0``,  ``1.24.0-1``,  ``1.24.0-0``,  ``1.21.0-0``,  ``1.20.0-0``,  ``1.18.1-0``,  ``1.16.0-0`` .. raw:: html
:depends bioconductor-biobase: ``>=2.62.0,<2.63.0`` :depends bioconductor-biocgenerics: ``>=0.48.0,<0.49.0`` :depends bioconductor-genefilter: ``>=1.84.0,<1.85.0`` :depends bioconductor-graphite: ``>=1.48.0,<1.49.0`` :depends bioconductor-gseabase: ``>=1.64.0,<1.65.0`` :depends r-base: ``>=4.3,<4.4.0a0`` :depends r-cluster: :depends r-corpcor: :depends r-gplots: :depends r-svd: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bioconductor-mogsa and update with:: mamba update bioconductor-mogsa To create a new environment, run:: mamba create --name myenvname bioconductor-mogsa with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bioconductor-mogsa: (see `bioconductor-mogsa/tags`_ for valid values for ````) .. |downloads_bioconductor-mogsa| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-mogsa.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-mogsa :alt: (downloads) .. |docker_bioconductor-mogsa| image:: https://quay.io/repository/biocontainers/bioconductor-mogsa/status :target: https://quay.io/repository/biocontainers/bioconductor-mogsa .. _`bioconductor-mogsa/tags`: https://quay.io/repository/biocontainers/bioconductor-mogsa?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-mogsa/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-mogsa/README.html