:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-nparc' .. highlight: bash bioconductor-nparc ================== .. conda:recipe:: bioconductor-nparc :replaces_section_title: :noindex: Non\-parametric analysis of response curves for thermal proteome profiling experiments :homepage: https://bioconductor.org/packages/3.18/bioc/html/NPARC.html :license: GPL-3 :recipe: /`bioconductor-nparc `_/`meta.yaml `_ Perform non\-parametric analysis of response curves as described by Childs\, Bach\, Franken et al. \(2019\)\: Non\-parametric analysis of thermal proteome profiles reveals novel drug\-binding proteins. .. conda:package:: bioconductor-nparc |downloads_bioconductor-nparc| |docker_bioconductor-nparc| :versions: ``1.14.0-0``,  ``1.12.0-0``,  ``1.10.0-0``,  ``1.6.0-0``,  ``1.4.0-0``,  ``1.2.0-1``,  ``1.2.0-0``,  ``1.0.1-0`` :depends bioconductor-biocparallel: ``>=1.36.0,<1.37.0`` :depends r-base: ``>=4.3,<4.4.0a0`` :depends r-broom: :depends r-dplyr: :depends r-magrittr: :depends r-mass: :depends r-rlang: :depends r-tidyr: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bioconductor-nparc and update with:: mamba update bioconductor-nparc To create a new environment, run:: mamba create --name myenvname bioconductor-nparc with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bioconductor-nparc: (see `bioconductor-nparc/tags`_ for valid values for ````) .. |downloads_bioconductor-nparc| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-nparc.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-nparc :alt: (downloads) .. |docker_bioconductor-nparc| image:: https://quay.io/repository/biocontainers/bioconductor-nparc/status :target: https://quay.io/repository/biocontainers/bioconductor-nparc .. _`bioconductor-nparc/tags`: https://quay.io/repository/biocontainers/bioconductor-nparc?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-nparc/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-nparc/README.html