:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'bioconductor-prince'
.. highlight: bash

bioconductor-prince
===================

.. conda:recipe:: bioconductor-prince
   :replaces_section_title:
   :noindex:

   Predicting Interactomes from Co\-Elution

   :homepage: https://bioconductor.org/packages/3.14/bioc/html/PrInCE.html
   :license: GPL-3 + file LICENSE
   :recipe: /`bioconductor-prince <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-prince>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-prince/meta.yaml>`_

   PrInCE \(Predicting Interactomes from Co\-Elution\) uses a naive Bayes classifier trained on dataset\-derived features to recover protein\-protein interactions from co\-elution chromatogram profiles. This package contains the R implementation of PrInCE.


.. conda:package:: bioconductor-prince

   |downloads_bioconductor-prince| |docker_bioconductor-prince|

   :versions:
      
      

      ``1.10.0-0``,  ``1.8.0-0``,  ``1.6.0-1``,  ``1.6.0-0``,  ``1.4.0-0``,  ``1.2.0-0``,  ``1.0.0-1``

      

   
   :depends bioconductor-biobase: ``>=2.54.0,<2.55.0``
   :depends bioconductor-msnbase: ``>=2.20.0,<2.21.0``
   :depends r-base: ``>=4.1,<4.2.0a0``
   :depends r-dplyr: ``>=0.7.4``
   :depends r-forecast: ``>=8.2``
   :depends r-hmisc: ``>=4.0``
   :depends r-liblinear: ``>=2.10-8``
   :depends r-magrittr: ``>=1.5``
   :depends r-naivebayes: ``>=0.9.1``
   :depends r-progress: ``>=1.1.2``
   :depends r-purrr: ``>=0.2.4``
   :depends r-ranger: ``>=0.8.0``
   :depends r-rdpack: ``>=0.7``
   :depends r-robustbase: ``>=0.92-7``
   :depends r-speedglm: ``>=0.3-2``
   :depends r-tester: ``>=0.1.7``
   :depends r-tidyr: ``>=0.8.99``
   :requirements:

   .. rubric:: Installation

   With an activated Bioconda channel (see :ref:`set-up-channels`), install with::

      conda install bioconductor-prince

   and update with::

      conda update bioconductor-prince

   or use the docker container::

      docker pull quay.io/biocontainers/bioconductor-prince:<tag>

   (see `bioconductor-prince/tags`_ for valid values for ``<tag>``)


.. |downloads_bioconductor-prince| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-prince.svg?style=flat
   :target: https://anaconda.org/bioconda/bioconductor-prince
   :alt:   (downloads)
.. |docker_bioconductor-prince| image:: https://quay.io/repository/biocontainers/bioconductor-prince/status
   :target: https://quay.io/repository/biocontainers/bioconductor-prince
.. _`bioconductor-prince/tags`: https://quay.io/repository/biocontainers/bioconductor-prince?tab=tags


.. raw:: html

    <script>
        var package = "bioconductor-prince";
        var versions = ["1.10.0","1.8.0","1.6.0","1.6.0","1.4.0"];
    </script>






Download stats
-----------------

.. raw:: html
    :file: ../../templates/package_dashboard.html

Link to this page
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Render an |install-with-bioconda| badge with the following MarkDown::

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.. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat
   :target: http://bioconda.github.io/recipes/bioconductor-prince/README.html