:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'bioconductor-rcellminer'
.. highlight: bash

bioconductor-rcellminer
=======================

.. conda:recipe:: bioconductor-rcellminer
   :replaces_section_title:
   :noindex:

   rcellminer\: Molecular Profiles\, Drug Response\, and Chemical Structures for the NCI\-60 Cell Lines

   :homepage: https://bioconductor.org/packages/3.14/bioc/html/rcellminer.html
   :license: LGPL-3 + file LICENSE
   :recipe: /`bioconductor-rcellminer <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-rcellminer>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-rcellminer/meta.yaml>`_

   The NCI\-60 cancer cell line panel has been used over the course of several decades as an anti\-cancer drug screen. This panel was developed as part of the Developmental Therapeutics Program \(DTP\, http\:\/\/dtp.nci.nih.gov\/\) of the U.S. National Cancer Institute \(NCI\). Thousands of compounds have been tested on the NCI\-60\, which have been extensively characterized by many platforms for gene and protein expression\, copy number\, mutation\, and others \(Reinhold\, et al.\, 2012\). The purpose of the CellMiner project \(http\:\/\/discover.nci.nih.gov\/ cellminer\) has been to integrate data from multiple platforms used to analyze the NCI\-60 and to provide a powerful suite of tools for exploration of NCI\-60 data.


.. conda:package:: bioconductor-rcellminer

   |downloads_bioconductor-rcellminer| |docker_bioconductor-rcellminer|

   :versions:
      
      

      ``2.16.0-0``,  ``2.14.0-0``,  ``2.12.1-0``,  ``2.11.1-0``,  ``2.10.0-0``,  ``2.8.0-1``,  ``2.6.0-1``,  ``2.4.0-0``

      

   
   :depends bioconductor-biobase: ``>=2.54.0,<2.55.0``
   :depends bioconductor-rcellminerdata: ``>=2.16.0,<2.17.0``
   :depends r-base: ``>=4.1,<4.2.0a0``
   :depends r-ggplot2: 
   :depends r-gplots: 
   :depends r-shiny: 
   :depends r-stringr: 
   :requirements:

   .. rubric:: Installation

   With an activated Bioconda channel (see :ref:`set-up-channels`), install with::

      conda install bioconductor-rcellminer

   and update with::

      conda update bioconductor-rcellminer

   or use the docker container::

      docker pull quay.io/biocontainers/bioconductor-rcellminer:<tag>

   (see `bioconductor-rcellminer/tags`_ for valid values for ``<tag>``)


.. |downloads_bioconductor-rcellminer| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-rcellminer.svg?style=flat
   :target: https://anaconda.org/bioconda/bioconductor-rcellminer
   :alt:   (downloads)
.. |docker_bioconductor-rcellminer| image:: https://quay.io/repository/biocontainers/bioconductor-rcellminer/status
   :target: https://quay.io/repository/biocontainers/bioconductor-rcellminer
.. _`bioconductor-rcellminer/tags`: https://quay.io/repository/biocontainers/bioconductor-rcellminer?tab=tags


.. raw:: html

    <script>
        var package = "bioconductor-rcellminer";
        var versions = ["2.16.0","2.14.0","2.12.1","2.11.1","2.10.0"];
    </script>






Download stats
-----------------

.. raw:: html
    :file: ../../templates/package_dashboard.html

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