:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-redisparam' .. highlight: bash bioconductor-redisparam ======================= .. conda:recipe:: bioconductor-redisparam :replaces_section_title: :noindex: Provide a \'redis\' back\-end for BiocParallel :homepage: https://bioconductor.org/packages/3.18/bioc/html/RedisParam.html :license: Artistic-2.0 :recipe: /`bioconductor-redisparam `_/`meta.yaml `_ This package provides a Redis\-based back\-end for BiocParallel\, enabling an alternative mechanism for distributed computation. The The \'manager\' distributes tasks to a \'worker\' pool through a central Redis server\, rather than directly to workers as with other BiocParallel implementations. This means that the worker pool can change dynamically during job evaluation. All features of BiocParallel are supported\, including reproducible random number streams\, logging to the manager\, and alternative \'load balancing\' task distributions. .. conda:package:: bioconductor-redisparam |downloads_bioconductor-redisparam| |docker_bioconductor-redisparam| :versions: ``1.4.0-0``,  ``1.2.0-0``,  ``1.0.0-0`` :depends bioconductor-biocparallel: ``>=1.36.0,<1.37.0`` :depends r-base: ``>=4.3,<4.4.0a0`` :depends r-futile.logger: :depends r-redux: :depends r-withr: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bioconductor-redisparam and update with:: mamba update bioconductor-redisparam To create a new environment, run:: mamba create --name myenvname bioconductor-redisparam with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bioconductor-redisparam: (see `bioconductor-redisparam/tags`_ for valid values for ````) .. |downloads_bioconductor-redisparam| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-redisparam.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-redisparam :alt: (downloads) .. |docker_bioconductor-redisparam| image:: https://quay.io/repository/biocontainers/bioconductor-redisparam/status :target: https://quay.io/repository/biocontainers/bioconductor-redisparam .. _`bioconductor-redisparam/tags`: https://quay.io/repository/biocontainers/bioconductor-redisparam?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-redisparam/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-redisparam/README.html