:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-rtca' .. highlight: bash bioconductor-rtca ================= .. conda:recipe:: bioconductor-rtca :replaces_section_title: :noindex: Open\-source toolkit to analyse data from xCELLigence System \(RTCA\) :homepage: https://bioconductor.org/packages/3.18/bioc/html/RTCA.html :license: LGPL-3 :recipe: /`bioconductor-rtca `_/`meta.yaml `_ :links: biotools: :biotools:`rtca`, doi: :doi:`10.1016/j.compbiolchem.2013.12.004` Import\, analyze and visualize data from Roche\(R\) xCELLigence RTCA systems. The package imports real\-time cell electrical impedance data into R. As an alternative to commercial software shipped along the system\, the Bioconductor package RTCA provides several unique transformation \(normalization\) strategies and various visualization tools. .. conda:package:: bioconductor-rtca |downloads_bioconductor-rtca| |docker_bioconductor-rtca| :versions: .. raw:: html
1.54.0-01.52.0-01.50.0-01.46.0-01.44.0-01.42.0-11.42.0-01.40.0-01.38.0-0 ``1.54.0-0``,  ``1.52.0-0``,  ``1.50.0-0``,  ``1.46.0-0``,  ``1.44.0-0``,  ``1.42.0-1``,  ``1.42.0-0``,  ``1.40.0-0``,  ``1.38.0-0``,  ``1.36.0-1``,  ``1.34.1-0``,  ``1.34.0-0``,  ``1.32.0-0``,  ``1.30.0-0``,  ``1.28.0-0`` .. raw:: html
:depends bioconductor-biobase: ``>=2.62.0,<2.63.0`` :depends r-base: ``>=4.3,<4.4.0a0`` :depends r-gtools: :depends r-rcolorbrewer: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bioconductor-rtca and update with:: mamba update bioconductor-rtca To create a new environment, run:: mamba create --name myenvname bioconductor-rtca with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bioconductor-rtca: (see `bioconductor-rtca/tags`_ for valid values for ````) .. |downloads_bioconductor-rtca| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-rtca.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-rtca :alt: (downloads) .. |docker_bioconductor-rtca| image:: https://quay.io/repository/biocontainers/bioconductor-rtca/status :target: https://quay.io/repository/biocontainers/bioconductor-rtca .. _`bioconductor-rtca/tags`: https://quay.io/repository/biocontainers/bioconductor-rtca?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-rtca/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-rtca/README.html