:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'bioconductor-scpdata'
.. highlight: bash

bioconductor-scpdata
====================

.. conda:recipe:: bioconductor-scpdata
   :replaces_section_title:
   :noindex:

   Single\-Cell Proteomics Data Package

   :homepage: https://bioconductor.org/packages/3.14/data/experiment/html/scpdata.html
   :license: GPL-2
   :recipe: /`bioconductor-scpdata <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-scpdata>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-scpdata/meta.yaml>`_

   The package disseminates mass spectrometry \(MS\)\-based single\-cell proteomics \(SCP\) datasets. The data were collected from published work and formatted using the \`scp\` data structure. The data sets contain quantitative information at spectrum\, peptide and\/or protein level for single cells or minute sample amounts.


.. conda:package:: bioconductor-scpdata

   |downloads_bioconductor-scpdata| |docker_bioconductor-scpdata|

   :versions:
      
      

      ``1.2.0-0``,  ``1.0.0-0``

      

   
   :depends bioconductor-annotationhub: ``>=3.2.0,<3.3.0``
   :depends bioconductor-experimenthub: ``>=2.2.0,<2.3.0``
   :depends bioconductor-qfeatures: ``>=1.4.0,<1.5.0``
   :depends bioconductor-s4vectors: ``>=0.32.0,<0.33.0``
   :depends bioconductor-singlecellexperiment: ``>=1.16.0,<1.17.0``
   :depends curl: ``>=7.79.1,<8.0a0``
   :depends r-base: ``>=4.1,<4.2.0a0``
   :requirements:

   .. rubric:: Installation

   With an activated Bioconda channel (see :ref:`set-up-channels`), install with::

      conda install bioconductor-scpdata

   and update with::

      conda update bioconductor-scpdata

   or use the docker container::

      docker pull quay.io/biocontainers/bioconductor-scpdata:<tag>

   (see `bioconductor-scpdata/tags`_ for valid values for ``<tag>``)


.. |downloads_bioconductor-scpdata| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-scpdata.svg?style=flat
   :target: https://anaconda.org/bioconda/bioconductor-scpdata
   :alt:   (downloads)
.. |docker_bioconductor-scpdata| image:: https://quay.io/repository/biocontainers/bioconductor-scpdata/status
   :target: https://quay.io/repository/biocontainers/bioconductor-scpdata
.. _`bioconductor-scpdata/tags`: https://quay.io/repository/biocontainers/bioconductor-scpdata?tab=tags


.. raw:: html

    <script>
        var package = "bioconductor-scpdata";
        var versions = ["1.2.0","1.0.0"];
    </script>






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    :file: ../../templates/package_dashboard.html

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