:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-sharedobject' .. highlight: bash bioconductor-sharedobject ========================= .. conda:recipe:: bioconductor-sharedobject :replaces_section_title: :noindex: Sharing R objects across multiple R processes without memory duplication :homepage: https://bioconductor.org/packages/3.18/bioc/html/SharedObject.html :license: GPL-3 :recipe: /`bioconductor-sharedobject `_/`meta.yaml `_ This package is developed for facilitating parallel computing in R. It is capable to create an R object in the shared memory space and share the data across multiple R processes. It avoids the overhead of memory dulplication and data transfer\, which make sharing big data object across many clusters possible. .. conda:package:: bioconductor-sharedobject |downloads_bioconductor-sharedobject| |docker_bioconductor-sharedobject| :versions: .. raw:: html
1.16.0-01.12.0-11.12.0-01.8.0-21.8.0-11.8.0-01.6.0-01.4.0-11.4.0-0 ``1.16.0-0``,  ``1.12.0-1``,  ``1.12.0-0``,  ``1.8.0-2``,  ``1.8.0-1``,  ``1.8.0-0``,  ``1.6.0-0``,  ``1.4.0-1``,  ``1.4.0-0``,  ``1.2.2-0``,  ``1.0.0-0`` .. raw:: html
:depends bioconductor-biocgenerics: ``>=0.48.0,<0.49.0`` :depends bioconductor-biocgenerics: ``>=0.48.1,<0.49.0a0`` :depends libblas: ``>=3.9.0,<4.0a0`` :depends libgcc-ng: ``>=12`` :depends liblapack: ``>=3.9.0,<4.0a0`` :depends libstdcxx-ng: ``>=12`` :depends r-base: ``>=4.3,<4.4.0a0`` :depends r-bh: :depends r-rcpp: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bioconductor-sharedobject and update with:: mamba update bioconductor-sharedobject To create a new environment, run:: mamba create --name myenvname bioconductor-sharedobject with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bioconductor-sharedobject: (see `bioconductor-sharedobject/tags`_ for valid values for ````) .. |downloads_bioconductor-sharedobject| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-sharedobject.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-sharedobject :alt: (downloads) .. |docker_bioconductor-sharedobject| image:: https://quay.io/repository/biocontainers/bioconductor-sharedobject/status :target: https://quay.io/repository/biocontainers/bioconductor-sharedobject .. _`bioconductor-sharedobject/tags`: https://quay.io/repository/biocontainers/bioconductor-sharedobject?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-sharedobject/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-sharedobject/README.html