:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-txdb.rnorvegicus.biomart.igis' .. highlight: bash bioconductor-txdb.rnorvegicus.biomart.igis ========================================== .. conda:recipe:: bioconductor-txdb.rnorvegicus.biomart.igis :replaces_section_title: :noindex: Annotation package for TxDb object\(s\) :homepage: https://bioconductor.org/packages/3.18/data/annotation/html/TxDb.Rnorvegicus.BioMart.igis.html :license: Artistic-2.0 :recipe: /`bioconductor-txdb.rnorvegicus.biomart.igis `_/`meta.yaml `_ Exposes an annotation databases generated from BioMart by exposing these as TxDb objects .. conda:package:: bioconductor-txdb.rnorvegicus.biomart.igis |downloads_bioconductor-txdb.rnorvegicus.biomart.igis| |docker_bioconductor-txdb.rnorvegicus.biomart.igis| :versions: .. raw:: html
2.3.2-122.3.2-112.3.2-102.3.2-92.3.2-82.3.2-72.3.2-62.3.2-52.3.2-4 ``2.3.2-12``,  ``2.3.2-11``,  ``2.3.2-10``,  ``2.3.2-9``,  ``2.3.2-8``,  ``2.3.2-7``,  ``2.3.2-6``,  ``2.3.2-5``,  ``2.3.2-4``,  ``2.3.2-3``,  ``2.3.2-2``,  ``2.3.2-0`` .. raw:: html
:depends bioconductor-annotationdbi: ``>=1.64.0,<1.65.0`` :depends bioconductor-data-packages: ``>=20231203`` :depends bioconductor-genomicfeatures: ``>=1.54.0,<1.55.0`` :depends curl: :depends r-base: ``>=4.3,<4.4.0a0`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bioconductor-txdb.rnorvegicus.biomart.igis and update with:: mamba update bioconductor-txdb.rnorvegicus.biomart.igis To create a new environment, run:: mamba create --name myenvname bioconductor-txdb.rnorvegicus.biomart.igis with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bioconductor-txdb.rnorvegicus.biomart.igis: (see `bioconductor-txdb.rnorvegicus.biomart.igis/tags`_ for valid values for ````) .. |downloads_bioconductor-txdb.rnorvegicus.biomart.igis| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-txdb.rnorvegicus.biomart.igis.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-txdb.rnorvegicus.biomart.igis :alt: (downloads) .. |docker_bioconductor-txdb.rnorvegicus.biomart.igis| image:: https://quay.io/repository/biocontainers/bioconductor-txdb.rnorvegicus.biomart.igis/status :target: https://quay.io/repository/biocontainers/bioconductor-txdb.rnorvegicus.biomart.igis .. _`bioconductor-txdb.rnorvegicus.biomart.igis/tags`: https://quay.io/repository/biocontainers/bioconductor-txdb.rnorvegicus.biomart.igis?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-txdb.rnorvegicus.biomart.igis/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-txdb.rnorvegicus.biomart.igis/README.html