:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bird_tool_utils_python' .. highlight: bash bird_tool_utils_python ====================== .. conda:recipe:: bird_tool_utils_python :replaces_section_title: :noindex: Python utilities used as part of the bird suite of bioinformatic tools. :homepage: https://github.com/wwood/bird_tool_utils-python :license: GPL / GPL-3.0-or-later :recipe: /`bird_tool_utils_python `_/`meta.yaml `_ .. conda:package:: bird_tool_utils_python |downloads_bird_tool_utils_python| |docker_bird_tool_utils_python| :versions: ``0.4.1-0``,  ``0.3.6-0``,  ``0.2.17-0`` :depends argparse-manpage-birdtools: ``>=1.6`` :depends python: ``>=3.6`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bird_tool_utils_python and update with:: mamba update bird_tool_utils_python To create a new environment, run:: mamba create --name myenvname bird_tool_utils_python with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bird_tool_utils_python: (see `bird_tool_utils_python/tags`_ for valid values for ````) .. |downloads_bird_tool_utils_python| image:: https://img.shields.io/conda/dn/bioconda/bird_tool_utils_python.svg?style=flat :target: https://anaconda.org/bioconda/bird_tool_utils_python :alt: (downloads) .. |docker_bird_tool_utils_python| image:: https://quay.io/repository/biocontainers/bird_tool_utils_python/status :target: https://quay.io/repository/biocontainers/bird_tool_utils_python .. _`bird_tool_utils_python/tags`: https://quay.io/repository/biocontainers/bird_tool_utils_python?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bird_tool_utils_python/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bird_tool_utils_python/README.html