:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bpp-phyl' .. highlight: bash bpp-phyl ======== .. conda:recipe:: bpp-phyl :replaces_section_title: :noindex: Bio\+\+ is a set of C\+\+ libraries for Bioinformatics. :homepage: https://github.com/BioPP/bpp-phyl :license: CeCILL :recipe: /`bpp-phyl `_/`meta.yaml `_ .. conda:package:: bpp-phyl |downloads_bpp-phyl| |docker_bpp-phyl| :versions: ``2.4.1-4``,  ``2.4.1-3``,  ``2.4.1-2``,  ``2.4.1-1``,  ``2.4.1-0``,  ``2.2.0-1``,  ``2.2.0-0`` :depends bpp-seq: :depends libgcc-ng: ``>=12`` :depends libstdcxx-ng: ``>=12`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bpp-phyl and update with:: mamba update bpp-phyl To create a new environment, run:: mamba create --name myenvname bpp-phyl with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bpp-phyl: (see `bpp-phyl/tags`_ for valid values for ````) .. |downloads_bpp-phyl| image:: https://img.shields.io/conda/dn/bioconda/bpp-phyl.svg?style=flat :target: https://anaconda.org/bioconda/bpp-phyl :alt: (downloads) .. |docker_bpp-phyl| image:: https://quay.io/repository/biocontainers/bpp-phyl/status :target: https://quay.io/repository/biocontainers/bpp-phyl .. _`bpp-phyl/tags`: https://quay.io/repository/biocontainers/bpp-phyl?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bpp-phyl/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bpp-phyl/README.html