:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'chromosomer' .. highlight: bash chromosomer =========== .. conda:recipe:: chromosomer :replaces_section_title: :noindex: A reference\-assisted assembly tool for producing draft chromosome sequences. :homepage: https://github.com/gtamazian/chromosomer :license: MIT :recipe: /`chromosomer `_/`meta.yaml `_ .. conda:package:: chromosomer |downloads_chromosomer| |docker_chromosomer| :versions: ``0.1.4a-2``,  ``0.1.4a-1``,  ``0.1.4a-0`` :depends bioformats: :depends future: :depends pyfaidx: :depends python: ``<3`` :requirements: .. rubric:: Installation With an activated Bioconda channel (see :ref:`set-up-channels`), install with:: conda install chromosomer and update with:: conda update chromosomer or use the docker container:: docker pull quay.io/biocontainers/chromosomer: (see `chromosomer/tags`_ for valid values for ````) .. |downloads_chromosomer| image:: https://img.shields.io/conda/dn/bioconda/chromosomer.svg?style=flat :target: https://anaconda.org/bioconda/chromosomer :alt: (downloads) .. |docker_chromosomer| image:: https://quay.io/repository/biocontainers/chromosomer/status :target: https://quay.io/repository/biocontainers/chromosomer .. _`chromosomer/tags`: https://quay.io/repository/biocontainers/chromosomer?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/chromosomer/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/chromosomer/README.html