:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'cmv' .. highlight: bash cmv === .. conda:recipe:: cmv :replaces_section_title: :noindex: A collection of tools for the visualisation of Hidden Markov Models \(HMMV\) and RNA\-family models \(CMV\). :homepage: https://github.com/eggzilla/cmv :license: GPL-3 :recipe: /`cmv `_/`meta.yaml `_ .. conda:package:: cmv |downloads_cmv| |docker_cmv| :versions: ``1.0.8-1``,  ``1.0.8-0``,  ``1.0.7-0``,  ``1.0.6-0``,  ``1.0.5-0``,  ``1.0.2-0`` :depends cairo: :depends gmp: ``5.1*`` :depends libgcc: :depends libxml2: :depends pango: :depends pthread-stubs: :depends xorg-libsm: :depends xorg-libxext: :depends xorg-libxrender: :depends zlib: ``1.2.11*`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install cmv and update with:: mamba update cmv To create a new environment, run:: mamba create --name myenvname cmv with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/cmv: (see `cmv/tags`_ for valid values for ````) .. |downloads_cmv| image:: https://img.shields.io/conda/dn/bioconda/cmv.svg?style=flat :target: https://anaconda.org/bioconda/cmv :alt: (downloads) .. |docker_cmv| image:: https://quay.io/repository/biocontainers/cmv/status :target: https://quay.io/repository/biocontainers/cmv .. _`cmv/tags`: https://quay.io/repository/biocontainers/cmv?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/cmv/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/cmv/README.html