:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'comparems2' .. highlight: bash comparems2 ========== .. conda:recipe:: comparems2 :replaces_section_title: :noindex: A simple tool developed to compare\, globally\, all MS\/MS spectra between two datasets \(in Mascot Generic Format or MGF\). :homepage: http://www.ms-utils.org/compareMS2.html :license: GPL3 :recipe: /`comparems2 `_/`meta.yaml `_ :links: biotools: :biotools:`comparems2`, doi: :doi:`10.1002/rcm.6162` .. conda:package:: comparems2 |downloads_comparems2| |docker_comparems2| :versions: ``1-5``,  ``1-4``,  ``1-3``,  ``1-2``,  ``1-1``,  ``1-0`` :depends libgcc-ng: ``>=12`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install comparems2 and update with:: mamba update comparems2 To create a new environment, run:: mamba create --name myenvname comparems2 with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/comparems2: (see `comparems2/tags`_ for valid values for ````) .. |downloads_comparems2| image:: https://img.shields.io/conda/dn/bioconda/comparems2.svg?style=flat :target: https://anaconda.org/bioconda/comparems2 :alt: (downloads) .. |docker_comparems2| image:: https://quay.io/repository/biocontainers/comparems2/status :target: https://quay.io/repository/biocontainers/comparems2 .. _`comparems2/tags`: https://quay.io/repository/biocontainers/comparems2?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/comparems2/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/comparems2/README.html