:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'crispr_studio' .. highlight: bash crispr_studio ============= .. conda:recipe:: crispr_studio :replaces_section_title: :noindex: CRISPRStudio is a program developed to facilitate and accelerate CRISPR array visualization :homepage: https://github.com/moineaulab/CRISPRStudio :license: GPL-3.0 :recipe: /`crispr_studio `_/`meta.yaml `_ .. conda:package:: crispr_studio |downloads_crispr_studio| |docker_crispr_studio| :versions: ``1-2``,  ``1-1``,  ``1-0`` :depends fasta3: :depends numpy: ``<=1.16.2`` :depends pandas: ``>=0.24.1`` :depends python: ``>=3.6,<3.7`` :depends scikit-bio: ``>=0.4.2`` :depends scipy: ``<=1.2.1`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install crispr_studio and update with:: mamba update crispr_studio To create a new environment, run:: mamba create --name myenvname crispr_studio with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/crispr_studio: (see `crispr_studio/tags`_ for valid values for ````) .. |downloads_crispr_studio| image:: https://img.shields.io/conda/dn/bioconda/crispr_studio.svg?style=flat :target: https://anaconda.org/bioconda/crispr_studio :alt: (downloads) .. |docker_crispr_studio| image:: https://quay.io/repository/biocontainers/crispr_studio/status :target: https://quay.io/repository/biocontainers/crispr_studio .. _`crispr_studio/tags`: https://quay.io/repository/biocontainers/crispr_studio?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/crispr_studio/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/crispr_studio/README.html