:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'demuxlet' .. highlight: bash demuxlet ======== .. conda:recipe:: demuxlet :replaces_section_title: :noindex: Genetic multiplexing of barcoded single cell RNA\-seq :homepage: https://github.com/statgen/demuxlet :license: GPL3 :recipe: /`demuxlet `_/`meta.yaml `_ .. conda:package:: demuxlet |downloads_demuxlet| |docker_demuxlet| :versions: ``1.0-4``,  ``1.0-3``,  ``1.0-2``,  ``1.0-1`` :depends htslib: ``>=1.10.2,<1.11.0a0`` :depends libgcc-ng: ``>=10.3.0`` :depends libstdcxx-ng: ``>=10.3.0`` :depends samtools: :requirements: .. rubric:: Installation With an activated Bioconda channel (see :ref:`set-up-channels`), install with:: conda install demuxlet and update with:: conda update demuxlet or use the docker container:: docker pull quay.io/biocontainers/demuxlet: (see `demuxlet/tags`_ for valid values for ````) .. |downloads_demuxlet| image:: https://img.shields.io/conda/dn/bioconda/demuxlet.svg?style=flat :target: https://anaconda.org/bioconda/demuxlet :alt: (downloads) .. |docker_demuxlet| image:: https://quay.io/repository/biocontainers/demuxlet/status :target: https://quay.io/repository/biocontainers/demuxlet .. _`demuxlet/tags`: https://quay.io/repository/biocontainers/demuxlet?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/demuxlet/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/demuxlet/README.html