:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'epic2' .. highlight: bash epic2 ===== .. conda:recipe:: epic2 :replaces_section_title: :noindex: Ultraperformant Chip\-Seq broad domain finder based on SICER. :homepage: http://github.com/endrebak/epic2 :license: MIT :recipe: /`epic2 `_/`meta.yaml `_ :links: doi: :doi:`10.1093/bioinformatics/btz232` .. conda:package:: epic2 |downloads_epic2| |docker_epic2| :versions: .. raw:: html
0.0.52-20.0.52-10.0.52-00.0.51-00.0.50-00.0.48-10.0.48-00.0.47-00.0.44-0 ``0.0.52-2``,  ``0.0.52-1``,  ``0.0.52-0``,  ``0.0.51-0``,  ``0.0.50-0``,  ``0.0.48-1``,  ``0.0.48-0``,  ``0.0.47-0``,  ``0.0.44-0``,  ``0.0.43-0``,  ``0.0.41-3``,  ``0.0.41-2``,  ``0.0.41-1``,  ``0.0.41-0``,  ``0.0.40-0``,  ``0.0.39-0``,  ``0.0.37-0``,  ``0.0.36-0``,  ``0.0.35-0``,  ``0.0.34-0``,  ``0.0.33-0``,  ``0.0.26-0``,  ``0.0.16-0``,  ``0.0.15-0`` .. raw:: html
:depends htslib: ``>=1.14,<1.15.0a0`` :depends libgcc-ng: ``>=10.3.0`` :depends libstdcxx-ng: ``>=10.3.0`` :depends natsort: :depends numpy: :depends pysam: :depends python: ``>=3.6,<3.7.0a0`` :depends python_abi: ``3.6.* *_cp36m`` :depends scipy: :requirements: .. rubric:: Installation With an activated Bioconda channel (see :ref:`set-up-channels`), install with:: conda install epic2 and update with:: conda update epic2 or use the docker container:: docker pull quay.io/biocontainers/epic2: (see `epic2/tags`_ for valid values for ````) .. |downloads_epic2| image:: https://img.shields.io/conda/dn/bioconda/epic2.svg?style=flat :target: https://anaconda.org/bioconda/epic2 :alt: (downloads) .. |docker_epic2| image:: https://quay.io/repository/biocontainers/epic2/status :target: https://quay.io/repository/biocontainers/epic2 .. _`epic2/tags`: https://quay.io/repository/biocontainers/epic2?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/epic2/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/epic2/README.html