:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'esme_openmpi_' .. highlight: bash esme_openmpi_ ============= .. conda:recipe:: esme :replaces_section_title: :noindex: Earth System Modelling Environment \(ESME\) \- A bundle for scientific computing packages for climate modelling with MPI support. :homepage: https://github.com/j34ni/bioconda-recipes :license: BSD / BSD-3-Clause :recipe: /`esme `_/`meta.yaml `_ ESME \(Earth System Modelling Environment\) is a package designed to facilitate the installation and management of various scientific computing libraries with support for multiple MPI implementations \(namely MPIch\, OpenMPI\, MVAPIch and ParaStationMPI\). This bundle currently includes\: \- PnetCDF\: Version 1.14.0 \- HDF5\: Version 1.14.5 \- netCDF\_C\: Version 4.9.2 \- netCDF\_Fortran\: Version 4.6.1 \- ParallelIO\: Version 2.6.5 \- ESMF\: Version 8.8.0 \- OSU\_Micro\_Benchmarks\: Version 7.5 .. conda:package:: esme_esmf__ |downloads_esme_esmf__| |docker_esme_esmf__| :versions: :requirements: :additional platforms: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install esme_esmf__ and update with:: mamba update esme_esmf__ To create a new environment, run:: mamba create --name myenvname esme_esmf__ with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/esme_esmf__: (see `esme_esmf__/tags`_ for valid values for ````) .. |downloads_esme_esmf__| image:: https://img.shields.io/conda/dn/bioconda/esme_esmf__.svg?style=flat :target: https://anaconda.org/bioconda/esme_esmf__ :alt: (downloads) .. |docker_esme_esmf__| image:: https://quay.io/repository/biocontainers/esme_openmpi_/status :target: https://quay.io/repository/biocontainers/esme_openmpi_ .. _`esme_esmf__/tags`: https://quay.io/repository/biocontainers/esme_esmf__?tab=tags .. raw:: html .. conda:package:: esme_hdf5__ |downloads_esme_hdf5__| |docker_esme_hdf5__| :versions: :requirements: :additional platforms: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install esme_hdf5__ and update with:: mamba update esme_hdf5__ To create a new environment, run:: mamba create --name myenvname esme_hdf5__ with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/esme_hdf5__: (see `esme_hdf5__/tags`_ for valid values for ````) .. |downloads_esme_hdf5__| image:: https://img.shields.io/conda/dn/bioconda/esme_hdf5__.svg?style=flat :target: https://anaconda.org/bioconda/esme_hdf5__ :alt: (downloads) .. |docker_esme_hdf5__| image:: https://quay.io/repository/biocontainers/esme_openmpi_/status :target: https://quay.io/repository/biocontainers/esme_openmpi_ .. _`esme_hdf5__/tags`: https://quay.io/repository/biocontainers/esme_hdf5__?tab=tags .. raw:: html .. conda:package:: esme_netcdf-c__ |downloads_esme_netcdf-c__| |docker_esme_netcdf-c__| :versions: :requirements: :additional platforms: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install esme_netcdf-c__ and update with:: mamba update esme_netcdf-c__ To create a new environment, run:: mamba create --name myenvname esme_netcdf-c__ with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/esme_netcdf-c__: (see `esme_netcdf-c__/tags`_ for valid values for ````) .. |downloads_esme_netcdf-c__| image:: https://img.shields.io/conda/dn/bioconda/esme_netcdf-c__.svg?style=flat :target: https://anaconda.org/bioconda/esme_netcdf-c__ :alt: (downloads) .. |docker_esme_netcdf-c__| image:: https://quay.io/repository/biocontainers/esme_openmpi_/status :target: https://quay.io/repository/biocontainers/esme_openmpi_ .. _`esme_netcdf-c__/tags`: https://quay.io/repository/biocontainers/esme_netcdf-c__?tab=tags .. raw:: html .. conda:package:: esme_netcdf-fortran__ |downloads_esme_netcdf-fortran__| |docker_esme_netcdf-fortran__| :versions: :requirements: :additional platforms: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install esme_netcdf-fortran__ and update with:: mamba update esme_netcdf-fortran__ To create a new environment, run:: mamba create --name myenvname esme_netcdf-fortran__ with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/esme_netcdf-fortran__: (see `esme_netcdf-fortran__/tags`_ for valid values for ````) .. |downloads_esme_netcdf-fortran__| image:: https://img.shields.io/conda/dn/bioconda/esme_netcdf-fortran__.svg?style=flat :target: https://anaconda.org/bioconda/esme_netcdf-fortran__ :alt: (downloads) .. |docker_esme_netcdf-fortran__| image:: https://quay.io/repository/biocontainers/esme_openmpi_/status :target: https://quay.io/repository/biocontainers/esme_openmpi_ .. _`esme_netcdf-fortran__/tags`: https://quay.io/repository/biocontainers/esme_netcdf-fortran__?tab=tags .. raw:: html .. conda:package:: esme_omb__ |downloads_esme_omb__| |docker_esme_omb__| :versions: :requirements: :additional platforms: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install esme_omb__ and update with:: mamba update esme_omb__ To create a new environment, run:: mamba create --name myenvname esme_omb__ with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/esme_omb__: (see `esme_omb__/tags`_ for valid values for ````) .. |downloads_esme_omb__| image:: https://img.shields.io/conda/dn/bioconda/esme_omb__.svg?style=flat :target: https://anaconda.org/bioconda/esme_omb__ :alt: (downloads) .. |docker_esme_omb__| image:: https://quay.io/repository/biocontainers/esme_openmpi_/status :target: https://quay.io/repository/biocontainers/esme_openmpi_ .. _`esme_omb__/tags`: https://quay.io/repository/biocontainers/esme_omb__?tab=tags .. raw:: html .. conda:package:: esme_openmpi_ |downloads_esme_openmpi_| |docker_esme_openmpi_| :versions: :requirements: :additional platforms: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install esme_openmpi_ and update with:: mamba update esme_openmpi_ To create a new environment, run:: mamba create --name myenvname esme_openmpi_ with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/esme_openmpi_: (see `esme_openmpi_/tags`_ for valid values for ````) .. |downloads_esme_openmpi_| image:: https://img.shields.io/conda/dn/bioconda/esme_openmpi_.svg?style=flat :target: https://anaconda.org/bioconda/esme_openmpi_ :alt: (downloads) .. |docker_esme_openmpi_| image:: https://quay.io/repository/biocontainers/esme_openmpi_/status :target: https://quay.io/repository/biocontainers/esme_openmpi_ .. _`esme_openmpi_/tags`: https://quay.io/repository/biocontainers/esme_openmpi_?tab=tags .. raw:: html .. conda:package:: esme_pio__ |downloads_esme_pio__| |docker_esme_pio__| :versions: :requirements: :additional platforms: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install esme_pio__ and update with:: mamba update esme_pio__ To create a new environment, run:: mamba create --name myenvname esme_pio__ with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/esme_pio__: (see `esme_pio__/tags`_ for valid values for ````) .. |downloads_esme_pio__| image:: https://img.shields.io/conda/dn/bioconda/esme_pio__.svg?style=flat :target: https://anaconda.org/bioconda/esme_pio__ :alt: (downloads) .. |docker_esme_pio__| image:: https://quay.io/repository/biocontainers/esme_openmpi_/status :target: https://quay.io/repository/biocontainers/esme_openmpi_ .. _`esme_pio__/tags`: https://quay.io/repository/biocontainers/esme_pio__?tab=tags .. raw:: html .. conda:package:: esme_pnetcdf__ |downloads_esme_pnetcdf__| |docker_esme_pnetcdf__| :versions: :requirements: :additional platforms: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install esme_pnetcdf__ and update with:: mamba update esme_pnetcdf__ To create a new environment, run:: mamba create --name myenvname esme_pnetcdf__ with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/esme_pnetcdf__: (see `esme_pnetcdf__/tags`_ for valid values for ````) .. |downloads_esme_pnetcdf__| image:: https://img.shields.io/conda/dn/bioconda/esme_pnetcdf__.svg?style=flat :target: https://anaconda.org/bioconda/esme_pnetcdf__ :alt: (downloads) .. |docker_esme_pnetcdf__| image:: https://quay.io/repository/biocontainers/esme_openmpi_/status :target: https://quay.io/repository/biocontainers/esme_openmpi_ .. _`esme_pnetcdf__/tags`: https://quay.io/repository/biocontainers/esme_pnetcdf__?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/esme_openmpi_/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/esme_openmpi_/README.html