:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'fastq-multx' .. highlight: bash fastq-multx =========== .. conda:recipe:: fastq-multx :replaces_section_title: :noindex: Demultiplexes a fastq. Capable of auto\-determining barcode id\'s based on a master set fields. Keeps multiple reads in\-sync during demultiplexing. Can verify that the reads are in\-sync as well\, and fail if they\'re not. :homepage: https://github.com/brwnj/fastq-multx :license: MIT :recipe: /`fastq-multx `_/`meta.yaml `_ .. conda:package:: fastq-multx |downloads_fastq-multx| |docker_fastq-multx| :versions: .. raw:: html
1.4.2-41.4.2-31.4.2-21.4.2-11.4.2-01.4.0-01.3.1-31.3.1-21.3.0-2 ``1.4.2-4``,  ``1.4.2-3``,  ``1.4.2-2``,  ``1.4.2-1``,  ``1.4.2-0``,  ``1.4.0-0``,  ``1.3.1-3``,  ``1.3.1-2``,  ``1.3.0-2``,  ``1.3.0-1`` .. raw:: html
:depends libgcc-ng: ``>=12`` :depends libstdcxx-ng: ``>=12`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install fastq-multx and update with:: mamba update fastq-multx To create a new environment, run:: mamba create --name myenvname fastq-multx with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/fastq-multx: (see `fastq-multx/tags`_ for valid values for ````) .. |downloads_fastq-multx| image:: https://img.shields.io/conda/dn/bioconda/fastq-multx.svg?style=flat :target: https://anaconda.org/bioconda/fastq-multx :alt: (downloads) .. |docker_fastq-multx| image:: https://quay.io/repository/biocontainers/fastq-multx/status :target: https://quay.io/repository/biocontainers/fastq-multx .. _`fastq-multx/tags`: https://quay.io/repository/biocontainers/fastq-multx?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/fastq-multx/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/fastq-multx/README.html