:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'fineradstructure' .. highlight: bash fineradstructure ================ .. conda:recipe:: fineradstructure :replaces_section_title: :noindex: Inference of population structure from RAD datasets :homepage: http://cichlid.gurdon.cam.ac.uk/fineRADstructure.html :license: Attribution-NonCommercial-NoDerivs 3.0 Creative Commons Licence :recipe: /`fineradstructure `_/`meta.yaml `_ .. conda:package:: fineradstructure |downloads_fineradstructure| |docker_fineradstructure| :versions: ``0.3.2r109-6``,  ``0.3.2r109-5``,  ``0.3.2r109-4``,  ``0.3.2r109-3``,  ``0.3.2r109-2``,  ``0.3.2r109-1``,  ``0.3.2r109-0`` :depends gsl: ``>=2.7,<2.8.0a0`` :depends libgcc-ng: ``>=12`` :depends libstdcxx-ng: ``>=12`` :depends libzlib: ``>=1.2.13,<1.3.0a0`` :depends zlib: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install fineradstructure and update with:: mamba update fineradstructure To create a new environment, run:: mamba create --name myenvname fineradstructure with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/fineradstructure: (see `fineradstructure/tags`_ for valid values for ````) .. |downloads_fineradstructure| image:: https://img.shields.io/conda/dn/bioconda/fineradstructure.svg?style=flat :target: https://anaconda.org/bioconda/fineradstructure :alt: (downloads) .. |docker_fineradstructure| image:: https://quay.io/repository/biocontainers/fineradstructure/status :target: https://quay.io/repository/biocontainers/fineradstructure .. _`fineradstructure/tags`: https://quay.io/repository/biocontainers/fineradstructure?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/fineradstructure/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/fineradstructure/README.html