:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'genenotebook' .. highlight: bash genenotebook ============ .. conda:recipe:: genenotebook :replaces_section_title: :noindex: A colleborative notebook for comparative genomics :homepage: https://genenotebook.github.io :license: AGPL-3.0 :recipe: /`genenotebook `_/`meta.yaml `_ .. conda:package:: genenotebook |downloads_genenotebook| |docker_genenotebook| :versions: .. raw:: html
0.3.2-20.3.2-10.3.2-00.3.1-10.3.1-00.3.0-00.1.16-40.1.16-30.1.15-4 ``0.3.2-2``,  ``0.3.2-1``,  ``0.3.2-0``,  ``0.3.1-1``,  ``0.3.1-0``,  ``0.3.0-0``,  ``0.1.16-4``,  ``0.1.16-3``,  ``0.1.15-4``,  ``0.1.14-2``,  ``0.1.13-0``,  ``0.1.12-0``,  ``0.1.11-0``,  ``0.1.10-0``,  ``0.1.9-0``,  ``0.1.8-0``,  ``0.1.7-0``,  ``0.1.6-1``,  ``0.1.5-1``,  ``0.1.4-1``,  ``0.1.4-0``,  ``0.1.3-0``,  ``0.1.2-1``,  ``0.1.2-0``,  ``0.1.1-0`` .. raw:: html
:depends blast: :depends libgcc-ng: ``>=12`` :depends libstdcxx-ng: ``>=12`` :depends mongodb: ``>=5.0`` :depends nodejs: ``>=15,<16`` :depends nodejs: ``>=15.14.0,<16.0a0`` :depends python_abi: ``3.11.* *_cp311`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install genenotebook and update with:: mamba update genenotebook To create a new environment, run:: mamba create --name myenvname genenotebook with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/genenotebook: (see `genenotebook/tags`_ for valid values for ````) .. |downloads_genenotebook| image:: https://img.shields.io/conda/dn/bioconda/genenotebook.svg?style=flat :target: https://anaconda.org/bioconda/genenotebook :alt: (downloads) .. |docker_genenotebook| image:: https://quay.io/repository/biocontainers/genenotebook/status :target: https://quay.io/repository/biocontainers/genenotebook .. _`genenotebook/tags`: https://quay.io/repository/biocontainers/genenotebook?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/genenotebook/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/genenotebook/README.html