:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'hclust2' .. highlight: bash hclust2 ======= .. conda:recipe:: hclust2 :replaces_section_title: :noindex: hclust2 is a handy tool for plotting heat\-maps :homepage: https://github.com/SegataLab/hclust2 :license: License :recipe: /`hclust2 `_/`meta.yaml `_ .. conda:package:: hclust2 |downloads_hclust2| |docker_hclust2| :versions: ``1.0.0-1``,  ``1.0.0-0``,  ``0.99-3``,  ``0.99-2``,  ``0.99-1``,  ``0.99-0``,  ``0.98.3d589ab-1``,  ``0.98.3d589ab-0`` :depends matplotlib-base: :depends numpy: :depends pandas: :depends python: :depends scipy: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install hclust2 and update with:: mamba update hclust2 To create a new environment, run:: mamba create --name myenvname hclust2 with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/hclust2: (see `hclust2/tags`_ for valid values for ````) .. |downloads_hclust2| image:: https://img.shields.io/conda/dn/bioconda/hclust2.svg?style=flat :target: https://anaconda.org/bioconda/hclust2 :alt: (downloads) .. |docker_hclust2| image:: https://quay.io/repository/biocontainers/hclust2/status :target: https://quay.io/repository/biocontainers/hclust2 .. _`hclust2/tags`: https://quay.io/repository/biocontainers/hclust2?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/hclust2/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/hclust2/README.html