:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'hera' .. highlight: bash hera ==== .. conda:recipe:: hera :replaces_section_title: :noindex: hera is a bioinformatics tool that helps analyze RNA\-seq data\, providing base\-to\-base alignment BAM files\, transcript abundance estimation\, and fusion gene detection. :homepage: https://github.com/bioturing/hera :license: MIT :recipe: /`hera `_/`meta.yaml `_ .. conda:package:: hera |downloads_hera| |docker_hera| :versions: .. raw:: html
1.1-71.1-61.1-51.1-41.1-31.1-21.1-11.1-01.0.1-0 ``1.1-7``,  ``1.1-6``,  ``1.1-5``,  ``1.1-4``,  ``1.1-3``,  ``1.1-2``,  ``1.1-1``,  ``1.1-0``,  ``1.0.1-0``,  ``1.0-0`` .. raw:: html
:depends bzip2: ``>=1.0.8,<2.0a0`` :depends hdf5: ``>=1.10.6,<1.10.7.0a0`` :depends htslib: ``>=1.14,<1.15.0a0`` :depends libdivsufsort: :depends libgcc-ng: ``>=10.3.0`` :depends libzlib: ``>=1.2.11,<1.3.0a0`` :depends python: :depends xz: ``>=5.2.5,<5.3.0a0`` :depends zlib: ``>=1.2.11,<1.3.0a0`` :requirements: .. rubric:: Installation With an activated Bioconda channel (see :ref:`set-up-channels`), install with:: conda install hera and update with:: conda update hera or use the docker container:: docker pull quay.io/biocontainers/hera: (see `hera/tags`_ for valid values for ````) .. |downloads_hera| image:: https://img.shields.io/conda/dn/bioconda/hera.svg?style=flat :target: https://anaconda.org/bioconda/hera :alt: (downloads) .. |docker_hera| image:: https://quay.io/repository/biocontainers/hera/status :target: https://quay.io/repository/biocontainers/hera .. _`hera/tags`: https://quay.io/repository/biocontainers/hera?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/hera/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/hera/README.html