:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'ipapy2' .. highlight: bash ipapy2 ====== .. conda:recipe:: ipapy2 :replaces_section_title: :noindex: Integrated Probabilistic Annotation \(IPA\) 2.0 \- Python implementation :homepage: https://github.com/francescodc87/ipaPy2 :license: MIT :recipe: /`ipapy2 `_/`meta.yaml `_ .. conda:package:: ipapy2 |downloads_ipapy2| |docker_ipapy2| :versions: ``1.3.0-0`` :depends molmass: ``>=2021.6.18`` :depends pandas: :depends python: ``>=3.8`` :depends scipy: ``>=1.8.1`` :depends tqdm: ``>=4.64.0`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install ipapy2 and update with:: mamba update ipapy2 To create a new environment, run:: mamba create --name myenvname ipapy2 with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/ipapy2: (see `ipapy2/tags`_ for valid values for ````) .. |downloads_ipapy2| image:: https://img.shields.io/conda/dn/bioconda/ipapy2.svg?style=flat :target: https://anaconda.org/bioconda/ipapy2 :alt: (downloads) .. |docker_ipapy2| image:: https://quay.io/repository/biocontainers/ipapy2/status :target: https://quay.io/repository/biocontainers/ipapy2 .. _`ipapy2/tags`: https://quay.io/repository/biocontainers/ipapy2?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/ipapy2/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/ipapy2/README.html