:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'jpredapi' .. highlight: bash jpredapi ======== .. conda:recipe:: jpredapi :replaces_section_title: :noindex: Python library for submitting jobs to JPRED \- A Protein Secondary Structure Prediction Server :homepage: https://github.com/MoseleyBioinformaticsLab/jpredapi :license: MIT / MIT :recipe: /`jpredapi `_/`meta.yaml `_ .. conda:package:: jpredapi |downloads_jpredapi| |docker_jpredapi| :versions: ``1.5.6-0`` :depends docopt: ``>=0.6.2`` :depends python: :depends requests: ``>=2.13.0`` :depends retrying: ``>=1.3.3`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install jpredapi and update with:: mamba update jpredapi To create a new environment, run:: mamba create --name myenvname jpredapi with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/jpredapi: (see `jpredapi/tags`_ for valid values for ````) .. |downloads_jpredapi| image:: https://img.shields.io/conda/dn/bioconda/jpredapi.svg?style=flat :target: https://anaconda.org/bioconda/jpredapi :alt: (downloads) .. |docker_jpredapi| image:: https://quay.io/repository/biocontainers/jpredapi/status :target: https://quay.io/repository/biocontainers/jpredapi .. _`jpredapi/tags`: https://quay.io/repository/biocontainers/jpredapi?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/jpredapi/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/jpredapi/README.html