:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'kipoi' .. highlight: bash kipoi ===== .. conda:recipe:: kipoi :replaces_section_title: :noindex: Kipoi\: model zoo for genomics :homepage: https://kipoi.org :documentation: https://kipoi.org/docs/ :developer docs: https://github.com/kipoi/kipoi :license: MIT / MIT :recipe: /`kipoi `_/`meta.yaml `_ Kipoi\: model zoo for genomics. .. conda:package:: kipoi |downloads_kipoi| |docker_kipoi| :versions: .. raw:: html
0.8.6-00.8.5-00.8.3-00.8.2-00.8.1-00.8.0-00.7.4-00.7.3-00.7.0-0 ``0.8.6-0``,  ``0.8.5-0``,  ``0.8.3-0``,  ``0.8.2-0``,  ``0.8.1-0``,  ``0.8.0-0``,  ``0.7.4-0``,  ``0.7.3-0``,  ``0.7.0-0``,  ``0.6.36-0``,  ``0.6.35-0``,  ``0.6.34-0``,  ``0.6.33-0``,  ``0.6.31-0``,  ``0.6.30-0``,  ``0.6.29-0``,  ``0.6.25-1``,  ``0.6.25-0``,  ``0.6.24-1``,  ``0.6.24-0``,  ``0.6.17-0``,  ``0.6.16-0``,  ``0.6.14-0``,  ``0.6.13-0``,  ``0.6.12-0``,  ``0.6.5-0``,  ``0.6.3-0``,  ``0.6.0-0``,  ``0.5.7-0``,  ``0.3.6-1``,  ``0.3.6-0`` .. raw:: html
:depends attrs: ``<=21.4.0`` :depends colorlog: :depends cookiecutter: ``>=1.6.0`` :depends deprecation: ``>=2.0.6`` :depends future: :depends h5py: :depends jinja2: :depends kipoi-conda: ``>=0.1.6`` :depends kipoi-utils: ``>=0.7.5`` :depends numpy: :depends pandas: ``>=0.21.0`` :depends python: :depends pyyaml: :depends related: ``>=0.6.0`` :depends tinydb: :depends tqdm: :depends urllib3: ``>=1.21.1`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install kipoi and update with:: mamba update kipoi To create a new environment, run:: mamba create --name myenvname kipoi with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/kipoi: (see `kipoi/tags`_ for valid values for ````) .. |downloads_kipoi| image:: https://img.shields.io/conda/dn/bioconda/kipoi.svg?style=flat :target: https://anaconda.org/bioconda/kipoi :alt: (downloads) .. |docker_kipoi| image:: https://quay.io/repository/biocontainers/kipoi/status :target: https://quay.io/repository/biocontainers/kipoi .. _`kipoi/tags`: https://quay.io/repository/biocontainers/kipoi?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/kipoi/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/kipoi/README.html