:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'lamps' .. highlight: bash lamps ===== .. conda:recipe:: lamps :replaces_section_title: :noindex: Liverpool Annotation of metabolites using Mass Spectrometry :homepage: https://pypi.org/project/lamps/ :developer docs: https://github.com/wanchanglin/lamp :license: GPL-3.0-or-later :recipe: /`lamps `_/`meta.yaml `_ .. conda:package:: lamps |downloads_lamps| |docker_lamps| :versions: ``1.0.3-0`` :depends numpy: :depends openpyxl: :depends pandas: :depends pyjanitor: :depends pyside6: :depends pyteomics: :depends python: ``>=3.8`` :depends scipy: :requirements: :additional platforms: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install lamps and update with:: mamba update lamps To create a new environment, run:: mamba create --name myenvname lamps with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/lamps: (see `lamps/tags`_ for valid values for ````) .. |downloads_lamps| image:: https://img.shields.io/conda/dn/bioconda/lamps.svg?style=flat :target: https://anaconda.org/bioconda/lamps :alt: (downloads) .. |docker_lamps| image:: https://quay.io/repository/biocontainers/lamps/status :target: https://quay.io/repository/biocontainers/lamps .. _`lamps/tags`: https://quay.io/repository/biocontainers/lamps?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/lamps/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/lamps/README.html