:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'links' .. highlight: bash links ===== .. conda:recipe:: links :replaces_section_title: :noindex: Long Interval Nucleotide K\-mer Scaffolder :homepage: https://github.com/bcgsc/LINKS :license: GPLv3 :recipe: /`links `_/`meta.yaml `_ .. conda:package:: links |downloads_links| |docker_links| :versions: .. raw:: html
2.0.1-42.0.1-32.0.1-22.0.1-12.0.1-02.0.0-01.8.7-31.8.7-21.8.7-1 ``2.0.1-4``,  ``2.0.1-3``,  ``2.0.1-2``,  ``2.0.1-1``,  ``2.0.1-0``,  ``2.0.0-0``,  ``1.8.7-3``,  ``1.8.7-2``,  ``1.8.7-1``,  ``1.8.7-0``,  ``1.8.6-0``,  ``1.8.4-0``,  ``1.5.2-0`` .. raw:: html
:depends libgcc-ng: ``>=12`` :depends libstdcxx-ng: ``>=12`` :depends make: :depends perl: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install links and update with:: mamba update links To create a new environment, run:: mamba create --name myenvname links with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/links: (see `links/tags`_ for valid values for ````) .. |downloads_links| image:: https://img.shields.io/conda/dn/bioconda/links.svg?style=flat :target: https://anaconda.org/bioconda/links :alt: (downloads) .. |docker_links| image:: https://quay.io/repository/biocontainers/links/status :target: https://quay.io/repository/biocontainers/links .. _`links/tags`: https://quay.io/repository/biocontainers/links?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/links/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/links/README.html