:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'lrez' .. highlight: bash lrez ==== .. conda:recipe:: lrez :replaces_section_title: :noindex: Standalone tool and library allowing to work with barcoded linked\-reads :homepage: https://github.com/morispi/LRez :license: AGPL-3.0-or-later AND MIT :recipe: /`lrez `_/`meta.yaml `_ .. conda:package:: lrez |downloads_lrez| |docker_lrez| :versions: .. raw:: html
2.2.4-22.2.4-12.2.4-02.2.3-22.2.3-12.2.3-02.2.2-02.2.1-02.2-0 ``2.2.4-2``,  ``2.2.4-1``,  ``2.2.4-0``,  ``2.2.3-2``,  ``2.2.3-1``,  ``2.2.3-0``,  ``2.2.2-0``,  ``2.2.1-0``,  ``2.2-0``,  ``2.1.3-0``,  ``2.1.2-0``,  ``2.1.1-0``,  ``2.1-0``,  ``2.0-0``,  ``1.1-1``,  ``1.1-0``,  ``1.0-0`` .. raw:: html
:depends boost-cpp: ``>=1.78.0,<1.78.1.0a0`` :depends libgcc-ng: ``>=12`` :depends libstdcxx-ng: ``>=12`` :depends libzlib: ``>=1.2.13,<1.3.0a0`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install lrez and update with:: mamba update lrez To create a new environment, run:: mamba create --name myenvname lrez with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/lrez: (see `lrez/tags`_ for valid values for ````) .. |downloads_lrez| image:: https://img.shields.io/conda/dn/bioconda/lrez.svg?style=flat :target: https://anaconda.org/bioconda/lrez :alt: (downloads) .. |docker_lrez| image:: https://quay.io/repository/biocontainers/lrez/status :target: https://quay.io/repository/biocontainers/lrez .. _`lrez/tags`: https://quay.io/repository/biocontainers/lrez?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/lrez/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/lrez/README.html