:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'mappy' .. highlight: bash mappy ===== .. conda:recipe:: mappy :replaces_section_title: :noindex: Minimap2 Python binding :homepage: https://github.com/lh3/minimap2 :license: MIT / MIT :recipe: /`mappy `_/`meta.yaml `_ .. conda:package:: mappy |downloads_mappy| |docker_mappy| :versions: .. raw:: html
2.28-02.27-12.27-02.26-12.26-02.24-42.24-22.24-12.24-0 ``2.28-0``,  ``2.27-1``,  ``2.27-0``,  ``2.26-1``,  ``2.26-0``,  ``2.24-4``,  ``2.24-2``,  ``2.24-1``,  ``2.24-0``,  ``2.23-0``,  ``2.22-0``,  ``2.21-0``,  ``2.17-3``,  ``2.17-2``,  ``2.17-1``,  ``2.17-0``,  ``2.16-0``,  ``2.15-0``,  ``2.14-0``,  ``2.13-0``,  ``2.12-0``,  ``2.11-0``,  ``2.10-1``,  ``2.9-1``,  ``2.8-1``,  ``2.8-0``,  ``2.7-1``,  ``2.7-0``,  ``2.6-0``,  ``2.5-0``,  ``2.4-0``,  ``2.2-0`` .. raw:: html
:depends libgcc-ng: ``>=12`` :depends libzlib: ``>=1.2.13,<1.3.0a0`` :depends python: ``>=3.10,<3.11.0a0`` :depends python_abi: ``3.10.* *_cp310`` :depends zlib: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install mappy and update with:: mamba update mappy To create a new environment, run:: mamba create --name myenvname mappy with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/mappy: (see `mappy/tags`_ for valid values for ````) .. |downloads_mappy| image:: https://img.shields.io/conda/dn/bioconda/mappy.svg?style=flat :target: https://anaconda.org/bioconda/mappy :alt: (downloads) .. |docker_mappy| image:: https://quay.io/repository/biocontainers/mappy/status :target: https://quay.io/repository/biocontainers/mappy .. _`mappy/tags`: https://quay.io/repository/biocontainers/mappy?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/mappy/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/mappy/README.html