:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'metabinkit' .. highlight: bash metabinkit ========== .. conda:recipe:: metabinkit :replaces_section_title: :noindex: Set of programs to perform taxonomic binning. :homepage: https://github.com/envmetagen/metabinkit :license: GPL / GPL-3 :recipe: /`metabinkit `_/`meta.yaml `_ :links: biotools: :biotools:`metabinkit`, doi: :doi:`10.5281/zenodo.3855032` .. conda:package:: metabinkit |downloads_metabinkit| |docker_metabinkit| :versions: .. raw:: html
0.2.2-40.2.2-30.2.2-20.2.2-10.2.2-00.2.1-00.2.0-00.1.8-00.1.7-0 ``0.2.2-4``,  ``0.2.2-3``,  ``0.2.2-2``,  ``0.2.2-1``,  ``0.2.2-0``,  ``0.2.1-0``,  ``0.2.0-0``,  ``0.1.8-0``,  ``0.1.7-0``,  ``0.1.6-0`` .. raw:: html
:depends blast: ``>=2.9.0`` :depends bzip2: ``>=1.0.8,<2.0a0`` :depends curl: ``>=7.81.0,<8.0a0`` :depends entrez-direct: :depends libgcc-ng: ``>=10.3.0`` :depends libzlib: ``>=1.2.11,<1.3.0a0`` :depends pcre: ``>=8.45,<9.0a0`` :depends perl: :depends perl-archive-tar: :depends perl-json: :depends perl-list-moreutils: :depends r-base: ``>=4.1,<4.2.0a0`` :depends r-data.table: :depends r-matrix: :depends r-optparse: :depends r-stringr: :depends taxonkit: ``0.6.0.*`` :depends zlib: ``>=1.2.11,<1.3.0a0`` :requirements: .. rubric:: Installation With an activated Bioconda channel (see :ref:`set-up-channels`), install with:: conda install metabinkit and update with:: conda update metabinkit or use the docker container:: docker pull quay.io/biocontainers/metabinkit: (see `metabinkit/tags`_ for valid values for ````) .. |downloads_metabinkit| image:: https://img.shields.io/conda/dn/bioconda/metabinkit.svg?style=flat :target: https://anaconda.org/bioconda/metabinkit :alt: (downloads) .. |docker_metabinkit| image:: https://quay.io/repository/biocontainers/metabinkit/status :target: https://quay.io/repository/biocontainers/metabinkit .. _`metabinkit/tags`: https://quay.io/repository/biocontainers/metabinkit?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/metabinkit/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/metabinkit/README.html