:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'modeltest-ng' .. highlight: bash modeltest-ng ============ .. conda:recipe:: modeltest-ng :replaces_section_title: :noindex: ModelTest\-NG is a tool for selecting the best\-fit model of evolution for DNA and protein alignments. :homepage: https://github.com/ddarriba/modeltest :documentation: https://github.com/ddarriba/modeltest/wiki :license: GPL / GPL-3.0 :recipe: /`modeltest-ng `_/`meta.yaml `_ :links: doi: :doi:`10.1093/molbev/msz189`, doi: :doi:`10.1093/sysbio/syu084` .. conda:package:: modeltest-ng |downloads_modeltest-ng| |docker_modeltest-ng| :versions: ``0.1.7-2``,  ``0.1.7-1``,  ``0.1.7-0``,  ``0.1.6-1``,  ``0.1.6-0``,  ``0.1.5-0`` :depends libgcc-ng: ``>=12`` :depends libstdcxx-ng: ``>=12`` :depends openmpi: ``>=4.1.5,<5.0a0`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install modeltest-ng and update with:: mamba update modeltest-ng To create a new environment, run:: mamba create --name myenvname modeltest-ng with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/modeltest-ng: (see `modeltest-ng/tags`_ for valid values for ````) .. |downloads_modeltest-ng| image:: https://img.shields.io/conda/dn/bioconda/modeltest-ng.svg?style=flat :target: https://anaconda.org/bioconda/modeltest-ng :alt: (downloads) .. |docker_modeltest-ng| image:: https://quay.io/repository/biocontainers/modeltest-ng/status :target: https://quay.io/repository/biocontainers/modeltest-ng .. _`modeltest-ng/tags`: https://quay.io/repository/biocontainers/modeltest-ng?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/modeltest-ng/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/modeltest-ng/README.html