:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'mypmfs_py' .. highlight: bash mypmfs_py ========= .. conda:recipe:: mypmfs_py :replaces_section_title: :noindex: Python package for mypmfs training \(includes batch download from PDB\). :homepage: https://github.com/bibip-impmc/mypmfs :license: MIT / MIT :recipe: /`mypmfs_py <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/mypmfs_py>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/mypmfs_py/meta.yaml>`_ :links: doi: :doi:`10.1016/j.biochi.2018.05.013` .. conda:package:: mypmfs_py |downloads_mypmfs_py| |docker_mypmfs_py| :versions: ``0.1.8-0``, ``0.1.7-0`` :depends libstdcxx-ng: :depends python: ``>=3.6`` :requirements: :additional platforms: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba <https://mamba.readthedocs.io>`_, `mamba <https://mamba.readthedocs.io>`_, or `conda <https://docs.conda.io/projects/conda>`_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here <https://mamba.readthedocs.io>`_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install mypmfs_py and update with:: mamba update mypmfs_py To create a new environment, run:: mamba create --name myenvname mypmfs_py with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs <https://mamba.readthedocs.io>`_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/mypmfs_py:<tag> (see `mypmfs_py/tags`_ for valid values for ``<tag>``) .. |downloads_mypmfs_py| image:: https://img.shields.io/conda/dn/bioconda/mypmfs_py.svg?style=flat :target: https://anaconda.org/bioconda/mypmfs_py :alt: (downloads) .. |docker_mypmfs_py| image:: https://quay.io/repository/biocontainers/mypmfs_py/status :target: https://quay.io/repository/biocontainers/mypmfs_py .. _`mypmfs_py/tags`: https://quay.io/repository/biocontainers/mypmfs_py?tab=tags .. raw:: html <script> var package = "mypmfs_py"; var versions = ["0.1.8","0.1.7"]; </script> Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [](http://bioconda.github.io/recipes/mypmfs_py/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/mypmfs_py/README.html