:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'nolb' .. highlight: bash nolb ==== .. conda:recipe:: nolb :replaces_section_title: :noindex: NOn\-Linear rigid Block NMA approach \(NOLB\) is a conceptually simple and computationally efficient method for non\-linear normal mode analysis. :homepage: https://team.inria.fr/nano-d/software/nolb-normal-modes/ :license: All rights reserved. The academic version is free. :recipe: /`nolb `_/`meta.yaml `_ The key observation of the method is that the angular velocity of a residue can be interpreted as the result of an implicit force\, such that the motion of the residue can be considered as a pure rotation about a certain center. .. conda:package:: nolb |downloads_nolb| |docker_nolb| :versions: ``1.9-0`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install nolb and update with:: mamba update nolb To create a new environment, run:: mamba create --name myenvname nolb with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/nolb: (see `nolb/tags`_ for valid values for ````) .. |downloads_nolb| image:: https://img.shields.io/conda/dn/bioconda/nolb.svg?style=flat :target: https://anaconda.org/bioconda/nolb :alt: (downloads) .. |docker_nolb| image:: https://quay.io/repository/biocontainers/nolb/status :target: https://quay.io/repository/biocontainers/nolb .. _`nolb/tags`: https://quay.io/repository/biocontainers/nolb?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/nolb/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/nolb/README.html