:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'parallel-meta-suite' .. highlight: bash parallel-meta-suite =================== .. conda:recipe:: parallel-meta-suite :replaces_section_title: :noindex: Parallel\-META\-Suite is an interactive software package for rapid and comprehensive microbiome analysis. :homepage: https://github.com/qdu-bioinfo/parallel-meta-suite :license: GPL3 :recipe: /`parallel-meta-suite `_/`meta.yaml `_ .. conda:package:: parallel-meta-suite |downloads_parallel-meta-suite| |docker_parallel-meta-suite| :versions: ``1.0-4``,  ``1.0-3``,  ``1.0-2``,  ``1.0-1``,  ``1.0-0`` :depends hmmer: :depends libgcc-ng: ``>=12`` :depends libstdcxx-ng: ``>=12`` :depends r-pheatmap: :depends vsearch: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install parallel-meta-suite and update with:: mamba update parallel-meta-suite To create a new environment, run:: mamba create --name myenvname parallel-meta-suite with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/parallel-meta-suite: (see `parallel-meta-suite/tags`_ for valid values for ````) .. |downloads_parallel-meta-suite| image:: https://img.shields.io/conda/dn/bioconda/parallel-meta-suite.svg?style=flat :target: https://anaconda.org/bioconda/parallel-meta-suite :alt: (downloads) .. |docker_parallel-meta-suite| image:: https://quay.io/repository/biocontainers/parallel-meta-suite/status :target: https://quay.io/repository/biocontainers/parallel-meta-suite .. _`parallel-meta-suite/tags`: https://quay.io/repository/biocontainers/parallel-meta-suite?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/parallel-meta-suite/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/parallel-meta-suite/README.html